RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 TUBG2Q9NRH3 451 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 SDHAF3Q9NRP4 125 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 PLA2G3Q9NZ20 509 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 CHRNA9Q9UGM1 479 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 SARDHQ9UL12 918 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 KIAA1257Q9ULG3 409 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 CNOT6Q9ULM6 557 aaKnown RBP6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 CAPN11Q9UMQ6 739 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 MYO3AQ8NEV4 1616 aa6.46□□□□□ -1.37
TRAPPC11-209ENST00000512476 DISP3Q9P2K9 1392 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 C5orf51A6NDU8 294 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 MAN2B1O00754 1011 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 KRT86O43790 486 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 LMNAP02545 664 aaKnown RBP6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 ODC1P11926 461 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 PEPDP12955 493 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 PTPN6P29350 595 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 BMI1P35226 326 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 PTGS2P35354 604 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 PSMC2P35998 433 aaKnown RBP6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 TARDBPQ13148 414 aaKnown RBP eCLIP6.46□□□□□ -1.381e-6■■□□□ 12.3
TRAPPC11-209ENST00000512476 CUL1Q13616 776 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 IL11RAQ14626 422 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 KIAA0930Q6ICG6 404 aaPredicted RBP6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 ETFRF1Q6IPR1 90 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 KLHL35Q6PF15 583 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 C6orf89Q6UWU4 347 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 CES3Q6UWW8 571 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 RSPO2Q6UXX9 243 aaPredicted RBP6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 CHST3Q7LGC8 479 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 WFDC3Q8IUB2 231 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 KSR1Q8IVT5 923 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 CCDC105Q8IYK2 499 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 ADGRF2Q8IZF7 708 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 FBXO18Q8NFZ0 1043 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 OR8K3Q8NH51 312 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 PPP1R13LQ8WUF5 828 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 TEKT4Q8WW24 435 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 INTS12Q96CB8 462 aaKnown RBP6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 TCTN2Q96GX1 697 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 NRSN2Q9GZP1 204 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 WNT10AQ9GZT5 417 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 SCOCQ9UIL1 159 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 ADAM18Q9Y3Q7 739 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 COMMD3-BMI1R4GMX3 469 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 RIMS2Q9UQ26 1411 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 NLRP1Q9C000 1473 aa6.46□□□□□ -1.38
TRAPPC11-209ENST00000512476 FAM90A18PA6NE21 464 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 FAM90A16PA6NEW6 464 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 SLC9B1P1A6NJY1 282 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 FAM90A9PA6NNJ1 464 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 FAM90A5PA8MXJ8 464 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 MYO1GB0I1T2 1018 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 RSPH10B2B2RC85 870 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 PEX12O00623 359 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 MEFVO15553 781 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 CIDEAO60543 219 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 SURF6O75683 361 aaKnown RBP6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 ITGB1P05556 798 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 ZFYP08048 801 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 FAM90A15PP0C7V4 464 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 FAM90A14PP0C7W9 464 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 RSPH10BP0C881 870 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 UROSP10746 265 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 MTHFD2P13995 350 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 TNFRSF1AP19438 455 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 PTPN4P29074 926 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 EVI2BP34910 448 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 CCR3P51677 355 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 SLC8A3P57103 927 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 SLC6A3Q01959 620 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 RPS6KA1Q15418 735 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 MED25Q71SY5 747 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 PRPF31Q8WWY3 499 aaKnown RBP6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 INSM2Q96T92 566 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 PRDM14Q9GZV8 571 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 P2RY12Q9H244 342 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 TMEM140Q9NV12 185 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 KLHL14Q9P2G3 628 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 LIMA1Q9UHB6 759 aaKnown RBP6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 TUBE1Q9UJT0 475 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 MKLN1Q9UL63 735 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 UBR1Q8IWV7 1749 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 ASXL1Q8IXJ9 1541 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 TARSL2A2RTX5 802 aaKnown RBP6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 EIF3CLB5ME19 914 aaKnown RBP6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 HRKO00198 91 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 ADAMDEC1O15204 470 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 ZNF185O15231 689 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 CTAG2O75638 210 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 KRT14P02533 472 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 HNRNPA2B1P22626 353 aaKnown RBP6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 CDKN1AP38936 164 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 CCT6AP40227 531 aaKnown RBP6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 MCAMP43121 646 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 SLC15A1P46059 708 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 BMXP51813 675 aa6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 NOP14P78316 857 aaKnown RBP6.45□□□□□ -1.38
TRAPPC11-209ENST00000512476 GUCY1B3Q02153 619 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms