RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 HORMAD1Q86X24 394 aa12.93□□□□□ -0.34
DDX41-215ENST00000512431 GRAMD1CQ8IYS0 662 aa12.93□□□□□ -0.34
DDX41-215ENST00000512431 WDR48Q8TAF3 677 aa12.93□□□□□ -0.34
DDX41-215ENST00000512431 FRS2Q8WU20 508 aa12.93□□□□□ -0.34
DDX41-215ENST00000512431 SEMA4DQ92854 862 aa12.93□□□□□ -0.34
DDX41-215ENST00000512431 GLMNQ92990 594 aa12.93□□□□□ -0.34
DDX41-215ENST00000512431 CCDC47Q96A33 483 aaKnown RBP12.93□□□□□ -0.34
DDX41-215ENST00000512431 SGF29Q96ES7 293 aa12.93□□□□□ -0.34
DDX41-215ENST00000512431 PRR11Q96HE9 360 aaPredicted RBP12.93□□□□□ -0.34
DDX41-215ENST00000512431 FZD3Q9NPG1 666 aa12.93□□□□□ -0.34
DDX41-215ENST00000512431 DYRK4Q9NR20 520 aa12.93□□□□□ -0.34
DDX41-215ENST00000512431 PPM1HQ9ULR3 514 aa12.93□□□□□ -0.34
DDX41-215ENST00000512431 MTMR6Q9Y217 621 aa12.93□□□□□ -0.34
DDX41-215ENST00000512431 CSNK1G3Q9Y6M4 447 aa12.93□□□□□ -0.34
DDX41-215ENST00000512431 ARID1BQ8NFD5 2236 aaPredicted RBP12.92□□□□□ -0.34
DDX41-215ENST00000512431 CCDC187A0A096LP49 1063 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 LY6G6EA0A0G2JKS1 128 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 A0A1W2PNU3 283 aaPredicted RBP12.92□□□□□ -0.34
DDX41-215ENST00000512431 EME2A4GXA9 379 aaPredicted RBP12.92□□□□□ -0.34
DDX41-215ENST00000512431 A6NNZ2 444 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 F5H5T6 163 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 PIK3R2O00459 728 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 MCF2LO15068 1137 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 FBXO21O94952 628 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 PCDH8O95206 1070 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 ITGA2BP08514 1039 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 PDGFRAP16234 1089 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 TACR2P21452 398 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 RPIAP49247 311 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 NUMBP49757 651 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 RGS7P49802 495 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 CLDN2P57739 230 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 NFKB2Q00653 900 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 NNTQ13423 1086 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 ADAM9Q13443 819 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 NR0B2Q15466 257 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 NFIL3Q16649 462 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 ZNF284Q2VY69 593 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 RAP1GAP2Q684P5 730 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 GUSBP11Q6P575 273 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 Q6ZSR6 202 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 PTAR1Q7Z6K3 402 aaPredicted RBP12.92□□□□□ -0.34
DDX41-215ENST00000512431 CHSY1Q86X52 802 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 EXTL1Q92935 676 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 CCDC114Q96M63 670 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 IL12RB2Q99665 862 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 SRRTQ9BXP5 876 aaKnown RBP12.92□□□□□ -0.34
DDX41-215ENST00000512431 ANKMY1Q9P2S6 941 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 SLC12A6Q9UHW9 1150 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 IPO11Q9UI26 975 aaKnown RBP12.92□□□□□ -0.34
DDX41-215ENST00000512431 SALL4Q9UJQ4 1053 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 U3KQA8 63 aa12.92□□□□□ -0.34
DDX41-215ENST00000512431 O00370 1275 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 ATP9BO43861 1147 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 ME1P48163 572 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 VASPP50552 380 aaPredicted RBP12.91□□□□□ -0.34
DDX41-215ENST00000512431 PLK1P53350 603 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 TAS2R38P59533 333 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 CUL2Q13617 745 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 SPIDRQ14159 915 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 DLG2Q15700 870 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 RABGAP1LQ5R372 815 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 TTC39BQ5VTQ0 682 aaPredicted RBP12.91□□□□□ -0.34
DDX41-215ENST00000512431 CRTC1Q6UUV9 634 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 ABI3BPQ7Z7G0 1075 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 CCAR2Q8N163 923 aaKnown RBP12.91□□□□□ -0.34
DDX41-215ENST00000512431 ZSCAN1Q8NBB4 408 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 ZNF548Q8NEK5 533 aaPredicted RBP12.91□□□□□ -0.34
DDX41-215ENST00000512431 DQX1Q8TE96 717 aaKnown RBP12.91□□□□□ -0.34
DDX41-215ENST00000512431 SLC35F5Q8WV83 523 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 FAM149B1Q96BN6 582 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 SLC39A13Q96H72 371 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 BTN2A3PQ96KV6 586 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 TRIM62Q9BVG3 475 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 MIS12Q9H081 205 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 SYNDIG1Q9H7V2 258 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 SEPT10Q9P0V9 454 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 SERTAD1Q9UHV2 236 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 HS3ST3A1Q9Y663 406 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 SPTA1P02549 2419 aa12.91□□□□□ -0.34
DDX41-215ENST00000512431 KPNA3O00505 521 aaPredicted RBP12.9□□□□□ -0.34
DDX41-215ENST00000512431 EFSO43281 561 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 SART1O43290 800 aaKnown RBP12.9□□□□□ -0.34
DDX41-215ENST00000512431 AQP9O43315 295 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 CSF2P04141 144 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 PRR29P0C7W0 189 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 GP1BBP13224 206 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 UBAP2LQ14157 1087 aaKnown RBP12.9□□□□□ -0.34
DDX41-215ENST00000512431 PIP5KL1Q5T9C9 394 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 OR6B2Q6IFH4 312 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 PMF1Q6P1K2 205 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 LCLAT1Q6UWP7 414 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 GCNT7Q6ZNI0 430 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 Q6ZVU0 165 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 C14orf80Q86SX3 495 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 PARGQ86W56 976 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 JAMLQ86YT9 394 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 SLC22A18ASQ8N1D0 253 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 ATP6V0D2Q8N8Y2 350 aa12.9□□□□□ -0.34
DDX41-215ENST00000512431 CLEC4CQ8WTT0 213 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms