RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 CACNA1HO95180 2353 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 COL4A1P02462 1669 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 UBN2Q6ZU65 1347 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 AP4M1O00189 453 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 SPRY2O43597 315 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 CBFA2T3O75081 653 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 EIF3JO75822 258 aaKnown RBP4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 KRT38O76015 456 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 NTSR2O95665 410 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 DLDP09622 509 aaKnown RBP4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 ENGP17813 658 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 DRD4P21917 467 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 PTGER1P34995 402 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 PIP4K2AP48426 406 aaPredicted RBP4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 EEFSECP57772 596 aaKnown RBP4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 E2F1Q01094 437 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 NSUN2Q08J23 767 aaKnown RBP eCLIP4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 ATP1A4Q13733 1029 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 PUM3Q15397 648 aaKnown RBP4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 TBC1D25Q3MII6 688 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 ARHGAP15Q53QZ3 475 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 AARS2Q5JTZ9 985 aaKnown RBP4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 SUSD4Q5VX71 490 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 ERAP2Q6P179 960 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 ZNF790Q6PG37 636 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 DPY19L3Q6ZPD9 716 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 SMC5Q8IY18 1101 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 SIRT6Q8N6T7 355 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 ZNF366Q8N895 744 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 C11orf44Q8N8P7 122 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 C9orf106Q8NAJ2 232 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 TBC1D16Q8TBP0 767 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 TRIB2Q92519 343 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 WDYHV1Q96HA8 205 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 HNRNPABQ99729 332 aaKnown RBP4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 THAP7Q9BT49 309 aaPredicted RBP4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 MTIF3Q9H2K0 278 aaKnown RBP4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 UBE2ZQ9H832 354 aaPredicted RBP4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 TMEM8AQ9HCN3 771 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 PTPRHQ9HD43 1115 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 IGSF9Q9P2J2 1179 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 MUTYHQ9UIF7 546 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 CA14Q9ULX7 337 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 ADAMTS5Q9UNA0 930 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 MAGED2Q9UNF1 606 aaPredicted RBP4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 DTNAQ9Y4J8 743 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 PLXNA1Q9UIW2 1896 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 KIF20BQ96Q89 1820 aa4.07□□□□□ -1.76
TOPBP1-208ENST00000511439 DMXL1Q9Y485 3027 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 DMDP11532 3685 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 CEMIPQ8WUJ3 1361 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 ZNF521Q96K83 1311 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 A8MVJ9 347 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 QSOX1O00391 747 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 ZNF213O14771 459 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 IKBKBO14920 756 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 PIP5K1BO14986 540 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 ZSCAN9O15535 394 aaPredicted RBP4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 DHHO43323 396 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 TCEA3O75764 348 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 UFL1O94874 794 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 GLP2RO95838 553 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 VIPP01282 170 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 CLTBP09497 229 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 NPSP0C0P6 89 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 KCNA5P22460 613 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 GPTP24298 496 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 PDIA3P30101 505 aaKnown RBP4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 TRAPPC10P48553 1259 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 VCPP55072 806 aaKnown RBP4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 EIF4A1P60842 406 aaKnown RBP4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 SUMO2P61956 95 aaKnown RBP4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 ICA1Q05084 483 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 GALNT1Q10472 559 aaPredicted RBP4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 MTAPQ13126 283 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 TNFAIP1Q13829 316 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 SPARCL1Q14515 664 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 ACOX1Q15067 660 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 DLGAP5Q15398 846 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 GRAMD1BQ3KR37 738 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 PCID2Q5JVF3 399 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 PSRC1Q6PGN9 363 aaPredicted RBP4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 SLC39A5Q6ZMH5 540 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 FSTL5Q8N475 847 aaPredicted RBP4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 ABHD11Q8NFV4 315 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 IPO4Q8TEX9 1081 aaKnown RBP4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 DDB2Q92466 427 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 TBC1D5Q92609 795 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 ZBED3Q96IU2 234 aaPredicted RBP4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 LENG8Q96PV6 779 aaPredicted RBP4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 VEZTQ9HBM0 779 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 NRIP3Q9NQ35 241 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 AMFRQ9UKV5 643 aa4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 GCN1Q92616 2671 aaKnown RBP4.06□□□□□ -1.76
TOPBP1-208ENST00000511439 ROCK2O75116 1388 aaKnown RBP4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 ANKRD36CQ5JPF3 1778 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 ERVV-1B6SEH8 477 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 KBTBD13C9JR72 458 aa4.05□□□□□ -1.76
TOPBP1-208ENST00000511439 NPC1O15118 1278 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms