RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 ZBP1Q9H171 429 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 SPG21Q9NZD8 308 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 MRPS17Q9Y2R5 130 aaKnown RBP6.07□□□□□ -1.44
GYPB-212ENST00000511198 PCDHB7Q9Y5E2 793 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 F5P12259 2224 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 SPG11Q96JI7 2443 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 ADGRG4Q8IZF6 3080 aa6.07□□□□□ -1.44
GYPB-212ENST00000511198 CRYBG3Q68DQ2 2970 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 TRGV11A0A075B6L2 103 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 CYP2D7A0A087X1C5 515 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 PRAMEF33A0A0G2JMD5 474 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 PRAMEF10O60809 474 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 RFPL2O75678 378 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 ZRANB2O95218 330 aaKnown RBP eCLIP6.06□□□□□ -1.44
GYPB-212ENST00000511198 MYBP10242 640 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 KCNA2P16389 499 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 ELAVL4P26378 380 aaKnown RBP6.06□□□□□ -1.44
GYPB-212ENST00000511198 CALML3P27482 149 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 HOXA6P31267 233 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 EIF2S3P41091 472 aaKnown RBP6.06□□□□□ -1.44
GYPB-212ENST00000511198 ALDH7A1P49419 539 aaKnown RBP6.06□□□□□ -1.44
GYPB-212ENST00000511198 CREB5Q02930 508 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 CCDC142Q17RM4 750 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 HSDL1Q3SXM5 330 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 PLK5Q496M5 336 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 CENPQQ7L2Z9 268 aaPredicted RBP6.06□□□□□ -1.44
GYPB-212ENST00000511198 GET4Q7L5D6 327 aaPredicted RBP6.06□□□□□ -1.44
GYPB-212ENST00000511198 SLC39A11Q8N1S5 342 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 TMIEQ8NEW7 156 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 PPTC7Q8NI37 304 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 WBP1Q96G27 269 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 ZNF558Q96NG5 402 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 FTHL17Q9BXU8 183 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 RHOBTB2Q9BYZ6 727 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 USP44Q9H0E7 712 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 PADI3Q9ULW8 664 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 DMTF1Q9Y222 760 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 CDYLQ9Y232 598 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 KIF26AQ9ULI4 1882 aaPredicted RBP6.06□□□□□ -1.44
GYPB-212ENST00000511198 EML5Q05BV3 1969 aa6.06□□□□□ -1.44
GYPB-212ENST00000511198 F8P00451 2351 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 NT5C1B-RDH14C9J2C7 533 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 TMEM232C9JQI7 657 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 INPPL1O15357 1258 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 MGEA5O60502 916 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 CTSAP10619 480 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 MYF5P13349 255 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 GATA3P23771 443 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 IL12RB1P42701 662 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 MRPS35P82673 323 aaKnown RBP6.05□□□□□ -1.44
GYPB-212ENST00000511198 KIAA0895LQ68EN5 471 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 PPP4R3AQ6IN85 833 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 TMPRSS9Q7Z410 1059 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 VPS52Q8N1B4 723 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 VOPP1Q96AW1 172 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 KXD1Q9BQD3 176 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 PACSIN1Q9BY11 444 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 ASPSCR1Q9BZE9 553 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 PLA2G2FQ9BZM2 168 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 TLK1Q9UKI8 766 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 MAN2B2Q9Y2E5 1009 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 CFAP20Q9Y6A4 193 aaKnown RBP6.05□□□□□ -1.44
GYPB-212ENST00000511198 HIVEP1P15822 2718 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 MTORP42345 2549 aa6.05□□□□□ -1.44
GYPB-212ENST00000511198 NIPBLQ6KC79 2804 aaeCLIP6.04□□□□□ -1.44
GYPB-212ENST00000511198 CCDC194A0A1B0GVG4 234 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 CLEC18AA5D8T8 446 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 DCLK1O15075 740 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 TLX3O43711 291 aaPredicted RBP6.04□□□□□ -1.44
GYPB-212ENST00000511198 SUN1O94901 812 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 CNPP09543 421 aaKnown RBP6.04□□□□□ -1.44
GYPB-212ENST00000511198 FTH1P19P0C7X4 201 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 PPM1AP35813 382 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 CALD1Q05682 793 aaKnown RBP6.04□□□□□ -1.44
GYPB-212ENST00000511198 KHDC1Q4VXA5 237 aaKnown RBP6.04□□□□□ -1.44
GYPB-212ENST00000511198 GORABQ5T7V8 394 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 VWA1Q6PCB0 445 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 CLEC18BQ6UXF7 455 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 CYP26C1Q6V0L0 522 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 Q6ZS52 159 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 CLNKQ7Z7G1 428 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 TMEM173Q86WV6 379 aaPredicted RBP6.04□□□□□ -1.44
GYPB-212ENST00000511198 RPAP2Q8IXW5 612 aaPredicted RBP6.04□□□□□ -1.44
GYPB-212ENST00000511198 CFAP52Q8N1V2 620 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 BOLLQ8N9W6 283 aaKnown RBP6.04□□□□□ -1.44
GYPB-212ENST00000511198 CLEC18CQ8NCF0 446 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 PDPRQ8NCN5 879 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 ACTRT2Q8TDY3 377 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 SDR42E1Q8WUS8 393 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 SMG7Q92540 1137 aaKnown RBP6.04□□□□□ -1.44
GYPB-212ENST00000511198 TMEM125Q96AQ2 219 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 CHMP4CQ96CF2 233 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 CAMK1GQ96NX5 476 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 CASD1Q96PB1 797 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 VRK1Q99986 396 aaPredicted RBP6.04□□□□□ -1.44
GYPB-212ENST00000511198 DUSP26Q9BV47 211 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 PCDH12Q9NPG4 1184 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 MAN1C1Q9NR34 630 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 NYAP2Q9P242 653 aa6.04□□□□□ -1.44
GYPB-212ENST00000511198 LRIT1Q9P2V4 623 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms