RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 PEAR1Q5VY43 1037 aaPredicted RBP12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 ZNF776Q68DI1 518 aaPredicted RBP12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 RWDD4Q6NW29 188 aaKnown RBP12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 SLC41A1Q8IVJ1 513 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 TMEFF1Q8IYR6 380 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 UMODL1-AS1Q8N2C9 162 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 RTL3Q8N8U3 475 aaKnown RBP12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 FAM131CQ96AQ9 280 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 TOE1Q96GM8 510 aaKnown RBP12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 SNRNP25Q9BV90 132 aaKnown RBP12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 NUP85Q9BW27 656 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 KLC2Q9H0B6 622 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 MAGEH1Q9H213 219 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 ZNHIT6Q9NWK9 470 aaKnown RBP12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 GPATCH2LQ9NWQ4 482 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 PCSK1NQ9UHG2 260 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 USP18Q9UMW8 372 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 SCML1Q9UN30 329 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 AP4E1Q9UPM8 1137 aa12.03□□□□□ -0.48
HMGXB3-203ENST00000510472 EML5Q05BV3 1969 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 MCF2LO15068 1137 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 CREB3O43889 395 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 TMEM253P0C7T8 217 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 DESP17661 470 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 FECHP22830 423 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 ACVRL1P37023 503 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 ETFBP38117 255 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 MPLP40238 635 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 HCAR3P49019 387 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 CLCN6P51797 869 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 ARF5P84085 180 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 RPL6Q02878 288 aaKnown RBP12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 CST6Q15828 149 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 BOLA3Q53S33 107 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 DAB2IPQ5VWQ8 1189 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 TXNRD3NBQ6F5E7 133 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 USP30Q70CQ3 517 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 KIAA2013Q8IYS2 634 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 STK40Q8N2I9 435 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 CADM4Q8NFZ8 388 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 OR2A12Q8NGT7 310 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 VOPP1Q96AW1 172 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 BTBD6Q96KE9 485 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 CCDC42Q96M95 316 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 KCTD15Q96SI1 283 aaPredicted RBP12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 EPAS1Q99814 870 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 SPON2Q9BUD6 331 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 PABPC3Q9H361 631 aaKnown RBP12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 VPS45Q9NRW7 570 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 TMEM74BQ9NUR3 256 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 UVRAGQ9P2Y5 699 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 IP6K2Q9UHH9 426 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 DNAI1Q9UI46 699 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 SLC25A13Q9UJS0 675 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 PPM1HQ9ULR3 514 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 CKAP5Q14008 2032 aa12.02□□□□□ -0.49
HMGXB3-203ENST00000510472 METTL12A8MUP2 240 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 MYO1FO00160 1098 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 CBX4O00257 560 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 ALOX15BO15296 676 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 FGF10O15520 208 aaPredicted RBP12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 KDELR3O43731 214 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 AKR1B10O60218 316 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 PRPSAP2O60256 369 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 H2AFZP0C0S5 128 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 ACADMP11310 421 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 ITPKAP23677 461 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 ACSL1P33121 698 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 DHPSP49366 369 aaPredicted RBP12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 YBEYP58557 167 aaPredicted RBP12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 CREB5Q02930 508 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 SLC25A11Q02978 314 aaKnown RBP12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 ZNF33AQ06730 810 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 POLD3Q15054 466 aaPredicted RBP12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 TCEAL1Q15170 157 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 DPYSL2Q16555 572 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 AFMIDQ63HM1 303 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 RETSATQ6NUM9 610 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 LINGO4Q6UY18 593 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 H2AFVQ71UI9 128 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 SYT12Q8IV01 421 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 MMAAQ8IVH4 418 aaKnown RBP12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 PLPP6Q8IY26 295 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 DEFB119Q8N690 84 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 FAM71BQ8TC56 605 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 DNASE2BQ8WZ79 361 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 ISG20Q96AZ6 181 aaKnown RBP12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 HINFPQ9BQA5 517 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 PCED1AQ9H1Q7 454 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 DHX35Q9H5Z1 703 aaKnown RBP12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 LRRC19Q9H756 370 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 ATP13A1Q9HD20 1204 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 SPTLC3Q9NUV7 552 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 CWC15Q9P013 229 aaKnown RBP12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 ANAPC7Q9UJX3 599 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 PILRBQ9UKJ0 227 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 SARDHQ9UL12 918 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 ACTL7AQ9Y615 435 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 GON4LQ3T8J9 2241 aa12.01□□□□□ -0.49
HMGXB3-203ENST00000510472 MID1O15344 667 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms