RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 MATN3O15232 486 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 BIRC5O15392 142 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 PSMD3O43242 534 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 MAFKO60675 156 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 USP12O75317 370 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 TADA2AO75478 443 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 DCTN3O75935 186 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 USP1O94782 785 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 RTN3O95197 1032 aaPredicted RBP4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 TGDSO95455 350 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 VNN2O95498 520 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 EFEMP2O95967 443 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 JCHAINP01591 159 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 IGLV3-27P01718 113 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 CXCL10P02778 98 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 ALDOAP04075 364 aaKnown RBP4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 POLBP06746 335 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 ITGA2BP08514 1039 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 ZDHHC11BP0C7U3 371 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 TROVE2P10155 538 aaKnown RBP eCLIP4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 CCNB1P14635 433 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 RHOQP17081 205 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 BGNP21810 368 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 CCNCP24863 283 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 DNAJB2P25686 324 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 CRHR1P34998 444 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 MAP2K2P36507 400 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 GP5P40197 560 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 GATMP50440 423 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 LIMK2P53671 638 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 TBX4P57082 545 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 TNK2Q07912 1038 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 SLC20A2Q08357 652 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 CDH17Q12864 832 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 SF3A3Q12874 501 aaKnown RBP eCLIP4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 ELAVL2Q12926 359 aaKnown RBP4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 BNIP1Q12981 228 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 GPR17Q13304 367 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 OLIG2Q13516 323 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 PRPSAP1Q14558 356 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 ARHGEF6Q15052 776 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 TRIP4Q15650 581 aaPredicted RBP4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 SEPT7Q16181 437 aaKnown RBP4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 DDR2Q16832 855 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 ANKRD20A4Q4UJ75 823 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 FAM133BQ5BKY9 247 aaKnown RBP4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 STXBP5Q5T5C0 1151 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 FAM171A1Q5VUB5 890 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 ARMC3Q5W041 872 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 FBXW10Q5XX13 1052 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 NAPEPLDQ6IQ20 393 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 TIGD7Q6NT04 549 aaPredicted RBP4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 RWDD4Q6NW29 188 aaKnown RBP4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 KYAT3Q6YP21 454 aaKnown RBP4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 ARHGAP36Q6ZRI8 547 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 C14orf80Q86SX3 495 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 LINC00523Q86TU6 105 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 TMEM135Q86UB9 458 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 LRRC49Q8IUZ0 686 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 CCDC117Q8IWD4 279 aaPredicted RBP4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 TRIM42Q8IWZ5 723 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 UNC5BQ8IZJ1 945 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 ABI1Q8IZP0 508 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 NDUFAF2Q8N183 169 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 UMODL1-AS1Q8N2C9 162 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 LRRC43Q8N309 656 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 FITM2Q8N6M3 262 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 CNTD1Q8N815 330 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 ATAD1Q8NBU5 361 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 STKLD1Q8NE28 680 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 DBF4BQ8NFT6 615 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 SPPL2BQ8TCT7 592 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 C2orf15Q8WU43 125 aaKnown RBP4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 BCL7CQ8WUZ0 217 aaPredicted RBP4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 FBXO32Q969P5 355 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 ZNF669Q96BR6 464 aaPredicted RBP4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 ERP27Q96DN0 273 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 SPATA17Q96L03 361 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 C1orf74Q96LT6 269 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 C7orf26Q96N11 449 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 AGAP3Q96P47 875 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 FAM193BQ96PV7 902 aaPredicted RBP4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 FCRL5Q96RD9 977 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 IL12RB2Q99665 862 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 TBL1YQ9BQ87 522 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 TMEM175Q9BSA9 504 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 MCMBPQ9BTE3 642 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 KIFC1Q9BW19 673 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 TTLL2Q9BWV7 592 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 TSSK1BQ9BXA7 367 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 OXCT2Q9BYC2 517 aaPredicted RBP4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 GPR62Q9BZJ7 368 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 IL22Q9GZX6 179 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 IQCGQ9H095 443 aaKnown RBP4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 MYLK2Q9H1R3 596 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 NOL6Q9H6R4 1146 aaKnown RBP4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 MANSC1Q9H8J5 431 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 ECT2Q9H8V3 914 aa4.86□□□□□ -1.63
PDLIM5-214ENST00000510099 MRM3Q9HC36 420 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms