RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 C19orf43Q9BQ61 176 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 TRIM2Q9C040 744 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 KRT23Q9C075 422 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 SYNDIG1Q9H7V2 258 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 JMJD4Q9H9V9 463 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 PARVBQ9HBI1 364 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 INTS7Q9NVH2 962 aaKnown RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 IL37Q9NZH6 218 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 CACNG4Q9UBN1 327 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 ADD3Q9UEY8 706 aaKnown RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 ZNF214Q9UL59 606 aaPredicted RBP4.68□□□□□ -1.66
NIPBL-206ENST00000509429 VANGL2Q9ULK5 521 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 AURKCQ9UQB9 309 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 GAB2Q9UQC2 676 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 TELO2Q9Y4R8 837 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 PCDHGB6Q9Y5F9 930 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 HS3ST4Q9Y661 456 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 UHRF1BP1Q6BDS2 1440 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 CDC42BPAQ5VT25 1732 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 ATP8B3O60423 1300 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 MRC2Q9UBG0 1479 aa4.68□□□□□ -1.66
NIPBL-206ENST00000509429 INSRP06213 1382 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 ANKRD30BQ9BXX2 1392 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 ARHGEF5Q12774 1597 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 PTPRGP23470 1445 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 TROQ12816 1431 aaPredicted RBP4.67□□□□□ -1.66
NIPBL-206ENST00000509429 KIAA1107Q9UPP5 1409 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 WDR91A4D1P6 747 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 PI4KAP2A4QPH2 592 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 B2RBV5 119 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 GCOM1H8Y6P7 765 aaPredicted RBP4.67□□□□□ -1.66
NIPBL-206ENST00000509429 PLD2O14939 933 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 SLC25A17O43808 307 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 PPM1BO75688 479 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 TSPAN9O75954 239 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 MT-CO1P00395 513 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 APOEP02649 317 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 HRGP04196 525 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 GLAP06280 429 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 FGF4P08620 206 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 MYZAPP0CAP1 466 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 CCDC166P0CW27 439 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 TPBGLP0DKB5 382 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 ANPEPP15144 967 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 NAGAP17050 411 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 TBXAS1P24557 533 aaPredicted RBP4.67□□□□□ -1.66
NIPBL-206ENST00000509429 ACSL1P33121 698 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 BMI1P35226 326 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 EIF4A3P38919 411 aaKnown RBP4.67□□□□□ -1.66
NIPBL-206ENST00000509429 PCP4P48539 62 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 CCR3P51677 355 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 GBX2P52951 348 aaPredicted RBP4.67□□□□□ -1.66
NIPBL-206ENST00000509429 ARL4CP56559 192 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 GSDMDP57764 484 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 GMFBP60983 142 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 TPM4P67936 248 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 CYP4F2P78329 520 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 KCNJ10P78508 379 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 S100A12P80511 92 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 CYP4F3Q08477 520 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 CSTF3Q12996 717 aaKnown RBP4.67□□□□□ -1.66
NIPBL-206ENST00000509429 ACAP2Q15057 778 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 TOR1AIP1Q5JTV8 583 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 SLC25A24Q6NUK1 477 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 SLC2A7Q6PXP3 512 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 KDM7AQ6ZMT4 941 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 KIF6Q6ZMV9 814 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 ADAT2Q7Z6V5 191 aaKnown RBP4.67□□□□□ -1.66
NIPBL-206ENST00000509429 PRPF39Q86UA1 669 aaKnown RBP4.67□□□□□ -1.66
NIPBL-206ENST00000509429 SLC51BQ86UW2 128 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 UNC5CLQ8IV45 518 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 APLFQ8IW19 511 aaPredicted RBP4.67□□□□□ -1.66
NIPBL-206ENST00000509429 DENND6AQ8IWF6 608 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 HDDC3Q8N4P3 179 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 CCDC63Q8NA47 563 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 FAM98AQ8NCA5 519 aaKnown RBP4.67□□□□□ -1.66
NIPBL-206ENST00000509429 HUS1BQ8NHY5 278 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 KLHDC4Q8TBB5 520 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 PIP4K2CQ8TBX8 421 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 ADAMTS15Q8TE58 950 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 GANCQ8TET4 914 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 IRGQQ8WZA9 623 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 ZUFSPQ96AP4 578 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 CEP19Q96LK0 163 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 ADAD1Q96M93 576 aaKnown RBP4.67□□□□□ -1.66
NIPBL-206ENST00000509429 ZNF778Q96MU6 729 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 CLUHP3Q96NS8 147 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 CITED2Q99967 270 aaPredicted RBP4.67□□□□□ -1.66
NIPBL-206ENST00000509429 TRIM62Q9BVG3 475 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 NT5C1AQ9BXI3 368 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 STK33Q9BYT3 514 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 PITHD1Q9GZP4 211 aaPredicted RBP4.67□□□□□ -1.66
NIPBL-206ENST00000509429 REXO4Q9GZR2 422 aaKnown RBP4.67□□□□□ -1.66
NIPBL-206ENST00000509429 PAIP1Q9H074 479 aaKnown RBP4.67□□□□□ -1.66
NIPBL-206ENST00000509429 FAM107BQ9H098 131 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 KLHL25Q9H0H3 589 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 KCNH6Q9H252 994 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 ZSCAN16Q9H4T2 348 aaPredicted RBP4.67□□□□□ -1.66
NIPBL-206ENST00000509429 TASP1Q9H6P5 420 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms