RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 SFMBT2Q5VUG0 894 aa19.12■□□□□ 0.65
UBE3D-207ENST00000509102 KIAA0895LQ68EN5 471 aa19.12■□□□□ 0.65
UBE3D-207ENST00000509102 ACAD10Q6JQN1 1059 aa19.12■□□□□ 0.65
UBE3D-207ENST00000509102 RETSATQ6NUM9 610 aa19.12■□□□□ 0.65
UBE3D-207ENST00000509102 RWDD4Q6NW29 188 aaKnown RBP19.12■□□□□ 0.65
UBE3D-207ENST00000509102 MON1BQ7L1V2 547 aa19.12■□□□□ 0.65
UBE3D-207ENST00000509102 ADAT2Q7Z6V5 191 aaKnown RBP19.12■□□□□ 0.65
UBE3D-207ENST00000509102 OR52K2Q8NGK3 314 aa19.12■□□□□ 0.65
UBE3D-207ENST00000509102 OR2T34Q8NGX1 318 aa19.12■□□□□ 0.65
UBE3D-207ENST00000509102 FRS2Q8WU20 508 aa19.12■□□□□ 0.65
UBE3D-207ENST00000509102 SKA1Q96BD8 255 aa19.12■□□□□ 0.65
UBE3D-207ENST00000509102 FAM129BQ96TA1 746 aa19.12■□□□□ 0.65
UBE3D-207ENST00000509102 SPON2Q9BUD6 331 aa19.12■□□□□ 0.65
UBE3D-207ENST00000509102 OSBPL2Q9H1P3 480 aa19.12■□□□□ 0.65
UBE3D-207ENST00000509102 NEUROG2Q9H2A3 272 aa19.12■□□□□ 0.65
UBE3D-207ENST00000509102 DNAAF2Q9NVR5 837 aaKnown RBP19.12■□□□□ 0.65
UBE3D-207ENST00000509102 ADAMTS1Q9UHI8 967 aa19.12■□□□□ 0.65
UBE3D-207ENST00000509102 LRRC53A6NM62 1247 aa19.11■□□□□ 0.65
UBE3D-207ENST00000509102 UPK3BL1B0FP48 263 aa19.11■□□□□ 0.65
UBE3D-207ENST00000509102 UPK3BL2E5RIL1 263 aa19.11■□□□□ 0.65
UBE3D-207ENST00000509102 NRG1Q02297 640 aaPredicted RBP19.11■□□□□ 0.65
UBE3D-207ENST00000509102 HNRNPDQ14103 355 aaKnown RBP19.11■□□□□ 0.65
UBE3D-207ENST00000509102 N4BP2L1Q5TBK1 243 aaPredicted RBP19.11■□□□□ 0.65
UBE3D-207ENST00000509102 WDR59Q6PJI9 974 aa19.11■□□□□ 0.65
UBE3D-207ENST00000509102 Q6ZVU0 165 aa19.11■□□□□ 0.65
UBE3D-207ENST00000509102 OR14C36Q8NHC7 312 aa19.11■□□□□ 0.65
UBE3D-207ENST00000509102 VCPIP1Q96JH7 1222 aa19.11■□□□□ 0.65
UBE3D-207ENST00000509102 MCEEQ96PE7 176 aa19.11■□□□□ 0.65
UBE3D-207ENST00000509102 FUCA2Q9BTY2 467 aa19.11■□□□□ 0.65
UBE3D-207ENST00000509102 ATP13A1Q9HD20 1204 aa19.11■□□□□ 0.65
UBE3D-207ENST00000509102 OSGEPQ9NPF4 335 aa19.11■□□□□ 0.65
UBE3D-207ENST00000509102 VPS51Q9UID3 782 aa19.11■□□□□ 0.65
UBE3D-207ENST00000509102 CBX4O00257 560 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 MCF2LO15068 1137 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 SLC7A4O43246 635 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 GJB6O95452 261 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 SRCP12931 536 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 VAV1P15498 845 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 MAPKAPK2P49137 400 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 ZNF143P52747 638 aaPredicted RBP19.1■□□□□ 0.65
UBE3D-207ENST00000509102 GALCP54803 685 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 SLC20A2Q08357 652 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 ZNF252P-AS1Q0IIN9 211 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 SEMA3BQ13214 749 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 IQCB1Q15051 598 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 EFHC2Q5JST6 749 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 SCYL2Q6P3W7 929 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 NCEH1Q6PIU2 408 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 IRF2BP2Q7Z5L9 587 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 SLFN11Q7Z7L1 901 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 DRC7Q8IY82 874 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 MCOLN2Q8IZK6 566 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 DEFB124Q8NES8 71 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 BAP1Q92560 729 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 CENPIQ92674 756 aaPredicted RBP19.1■□□□□ 0.65
UBE3D-207ENST00000509102 NTAN1Q96AB6 310 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 TBC1D31Q96DN5 1066 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 EDEM3Q9BZQ6 932 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 DYRK4Q9NR20 520 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 SERGEFQ9UGK8 458 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 HPCAL4Q9UM19 191 aa19.1■□□□□ 0.65
UBE3D-207ENST00000509102 A0A0D9SEW6 157 aa19.09■□□□□ 0.65
UBE3D-207ENST00000509102 SNAP91O60641 907 aa19.09■□□□□ 0.65
UBE3D-207ENST00000509102 PLEKP08567 350 aaPredicted RBP19.09■□□□□ 0.65
UBE3D-207ENST00000509102 RHOQP17081 205 aa19.09■□□□□ 0.65
UBE3D-207ENST00000509102 GRIA4P48058 902 aa19.09■□□□□ 0.65
UBE3D-207ENST00000509102 AIF1P55008 147 aa19.09■□□□□ 0.65
UBE3D-207ENST00000509102 HDAC4P56524 1084 aa19.09■□□□□ 0.65
UBE3D-207ENST00000509102 GEMIN4P57678 1058 aaKnown RBP19.09■□□□□ 0.65
UBE3D-207ENST00000509102 GNA12Q03113 381 aa19.09■□□□□ 0.65
UBE3D-207ENST00000509102 KLHL30Q0D2K2 578 aa19.09■□□□□ 0.65
UBE3D-207ENST00000509102 SKOR2Q2VWA4 1001 aaPredicted RBP19.09■□□□□ 0.65
UBE3D-207ENST00000509102 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.09■□□□□ 0.65
UBE3D-207ENST00000509102 AADATQ8N5Z0 425 aa19.09■□□□□ 0.65
UBE3D-207ENST00000509102 PSMB7Q99436 277 aa19.09■□□□□ 0.65
UBE3D-207ENST00000509102 CNPY3Q9BT09 278 aa19.09■□□□□ 0.65
UBE3D-207ENST00000509102 KDM4CQ9H3R0 1056 aa19.09■□□□□ 0.65
UBE3D-207ENST00000509102 GAREM1Q9H706 876 aa19.09■□□□□ 0.65
UBE3D-207ENST00000509102 CBX8Q9HC52 389 aa19.09■□□□□ 0.65
UBE3D-207ENST00000509102 TM9SF3Q9HD45 589 aa19.09■□□□□ 0.65
UBE3D-207ENST00000509102 PARVAQ9NVD7 372 aa19.09■□□□□ 0.65
UBE3D-207ENST00000509102 AIPL1Q9NZN9 384 aa19.09■□□□□ 0.65
UBE3D-207ENST00000509102 ANGPTL2Q9UKU9 493 aa19.09■□□□□ 0.65
UBE3D-207ENST00000509102 PCDH15Q96QU1 1955 aa19.08■□□□□ 0.65
UBE3D-207ENST00000509102 TBC1D3DA0A087WVF3 549 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 TBC1D3IA0A087WXS9 549 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 TBC1D3EA0A087X179 549 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 TBC1D3KA0A087X1G2 549 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 TBC1D3FA6NER0 549 aaPredicted RBP19.08■□□□□ 0.64
UBE3D-207ENST00000509102 TMCO5BA8MYB1 307 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 TBC1D3LB9A6J9 549 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 PRNPP04156 253 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 TBC1D3HP0C7X1 549 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 RRM1P23921 792 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 CSNK1EP49674 416 aaKnown RBP19.08■□□□□ 0.64
UBE3D-207ENST00000509102 CCR5P51681 352 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 ADPRHP54922 357 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 C21orf59P57076 290 aa19.08■□□□□ 0.64
UBE3D-207ENST00000509102 RACK1P63244 317 aaKnown RBP19.08■□□□□ 0.64
UBE3D-207ENST00000509102 TBC1D3GQ6DHY5 549 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms