RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 SYCE3A1L190 88 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 LRRC72A6NJI9 287 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 C2CD4BA6NLJ0 364 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 SMTNL1A8MU46 457 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 CBX4O00257 560 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 KCNK3O14649 394 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 ATP9BO43861 1147 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 SH3BP5O60239 455 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 ENDOD1O94919 500 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 TOP3BO95985 862 aaKnown RBP15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 C7P10643 843 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 FERP16591 822 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 C5AR1P21730 350 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 RRM1P23921 792 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 CD27P26842 260 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 PMLP29590 882 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 RFC1P35251 1148 aaPredicted RBP15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 AFF3P51826 1226 aaKnown RBP15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 FAM193AP78312 1265 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 KRT83P78385 493 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 SIM1P81133 766 aaPredicted RBP15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 C6orf118Q5T5N4 469 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 RWDD4Q6NW29 188 aaKnown RBP15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 ARCQ7LC44 396 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 ADAT2Q7Z6V5 191 aaKnown RBP15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 PIP4P1Q86T03 277 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 CCDC185Q8N715 623 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 C1orf74Q96LT6 269 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 SLC6A18Q96N87 628 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 HAPLN3Q96S86 360 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 BPIFA3Q9BQP9 254 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 C2orf49Q9BVC5 232 aaPredicted RBP15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 ZYG11BQ9C0D3 744 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 RTN4Q9NQC3 1192 aaKnown RBP15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 DOCK9Q9BZ29 2069 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 CHD8Q9HCK8 2581 aa15.18■□□□□ 0.02
UBE2D3-228ENST00000508974 IGLV3-10A0A075B6K4 115 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 TBC1D3DA0A087WVF3 549 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 TBC1D3IA0A087WXS9 549 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 TBC1D3EA0A087X179 549 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 TBC1D3KA0A087X1G2 549 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 TBC1D3FA6NER0 549 aaPredicted RBP15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 LRRC53A6NM62 1247 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 TMCO5BA8MYB1 307 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 TBC1D3LB9A6J9 549 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 FAM72CH0Y354 149 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 SMAD6O43541 496 aaKnown RBP15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 RTN2O75298 545 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 GJB3O75712 270 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 CER1O95813 267 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 CALB1P05937 261 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 TBC1D3HP0C7X1 549 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 GOT1P17174 413 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 GPD1P21695 349 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 ADRA1BP35368 520 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 DRD3P35462 400 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 PTPN9P43378 593 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 ADPRHP54922 357 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 HDAC4P56524 1084 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 SFSWAPQ12872 951 aaKnown RBP15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 KIF19Q2TAC6 998 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 HLA-BQ31612 363 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 ARL13BQ3SXY8 428 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 FILIP1LQ4L180 1135 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 ARTNQ5T4W7 220 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 FAM72AQ5TYM5 149 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 TBC1D3GQ6DHY5 549 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 TBC1D3CQ6IPX1 549 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 FAM72DQ6L9T8 149 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 DNAJC24Q6P3W2 148 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 WDR59Q6PJI9 974 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 MON1BQ7L1V2 547 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 DSG4Q86SJ6 1040 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 SETD3Q86TU7 594 aaPredicted RBP15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 FAM72BQ86X60 149 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 DNAAF5Q86Y56 855 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 PHF13Q86YI8 300 aaPredicted RBP15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 TBC1D3Q8IZP1 549 aaPredicted RBP15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 OR2T34Q8NGX1 318 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 PIP4K2CQ8TBX8 421 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 MCEEQ96PE7 176 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 ZDHHC5Q9C0B5 715 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 TNKS2Q9H2K2 1166 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 EBF2Q9HAK2 575 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 ATP13A1Q9HD20 1204 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 TAS2R14Q9NYV8 317 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 OR12D3Q9UGF7 316 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 ADAMTS1Q9UHI8 967 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 FZD4Q9ULV1 537 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 FNDC3AQ9Y2H6 1198 aaKnown RBP15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 SNX11Q9Y5W9 270 aa15.17■□□□□ 0.02
UBE2D3-228ENST00000508974 CCP110O43303 1012 aa15.16■□□□□ 0.02
UBE2D3-228ENST00000508974 MAT2AP31153 395 aaKnown RBP15.16■□□□□ 0.02
UBE2D3-228ENST00000508974 PPP2CBP62714 309 aa15.16■□□□□ 0.02
UBE2D3-228ENST00000508974 PPP2CAP67775 309 aa15.16■□□□□ 0.02
UBE2D3-228ENST00000508974 CNTN1Q12860 1018 aa15.16■□□□□ 0.02
UBE2D3-228ENST00000508974 TEAD4Q15561 434 aa15.16■□□□□ 0.02
UBE2D3-228ENST00000508974 KCNT1Q5JUK3 1230 aa15.16■□□□□ 0.02
UBE2D3-228ENST00000508974 SCYL2Q6P3W7 929 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms