RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 SLC25A13Q9UJS0 675 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 ANAPC7Q9UJX3 599 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 VPS28Q9UK41 221 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 HPCAL4Q9UM19 191 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 AP4E1Q9UPM8 1137 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 EPN1Q9Y6I3 576 aaPredicted RBP10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 NYNRINQ9P2P1 1898 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 SPTBN4Q9H254 2564 aa10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 TNRC6BQ9UPQ9 1833 aaKnown RBP10.86□□□□□ -0.67
POLR2J3-213ENST00000508848 C10orf142B7Z368 130 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 MCF2LO15068 1137 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 ATMINO43313 823 aaPredicted RBP10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 KDELR3O43731 214 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 SLC1A1P43005 524 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 MRE11P49959 708 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 ELF2Q15723 593 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 PLK5Q496M5 336 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 AFMIDQ63HM1 303 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 PMS2CLQ68D20 193 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 HEATR6Q6AI08 1181 aaKnown RBP10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 DSG4Q86SJ6 1040 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 KBTBD6Q86V97 674 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 SLC35G2Q8TBE7 412 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 CYB5D2Q8WUJ1 264 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 HMGB4Q8WW32 186 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 RFFLQ8WZ73 363 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 ARHGEF26Q96DR7 871 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 ZNF419Q96HQ0 510 aaPredicted RBP10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 LRIG1Q96JA1 1093 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 FAM129BQ96TA1 746 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 SNRNP25Q9BV90 132 aaKnown RBP10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 TRIM7Q9C029 511 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 MUC3BQ9H195 1237 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 KDM4CQ9H3R0 1056 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 SLCO3A1Q9UIG8 710 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 SMG5Q9UPR3 1016 aaKnown RBP10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 FARP1Q9Y4F1 1045 aaPredicted RBP10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 DMXL1Q9Y485 3027 aa10.85□□□□□ -0.67
POLR2J3-213ENST00000508848 A0A0D9SEW6 157 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 GFRA3O60609 400 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 RAMP2O60895 175 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 NDUFA10O95299 355 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 KRT7P08729 469 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 C5AR1P21730 350 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 WASP42768 502 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 ARSEP51690 589 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 GSDMDP57764 484 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 SLC25A11Q02978 314 aaKnown RBP10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 CCDC15Q0P6D6 951 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 SERINC3Q13530 473 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 POLD3Q15054 466 aaPredicted RBP10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 PDK2Q15119 407 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 SPA17Q15506 151 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 DLG2Q15700 870 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 ZNF776Q68DI1 518 aaPredicted RBP10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 RWDD4Q6NW29 188 aaKnown RBP10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 CEP68Q76N32 757 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 ASCL5Q7RTU5 278 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 CIR1Q86X95 450 aaPredicted RBP10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 DNAAF5Q86Y56 855 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 MAP7D3Q8IWC1 876 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 FAM160A2Q8N612 972 aaPredicted RBP10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 PCDH20Q8N6Y1 951 aaKnown RBP10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 TMIEQ8NEW7 156 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 TSC1Q92574 1164 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 CCDC114Q96M63 670 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 DCBLD2Q96PD2 775 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 PEBP4Q96S96 227 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 PHOX2BQ99453 314 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 DHX35Q9H5Z1 703 aaKnown RBP10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 NOL6Q9H6R4 1146 aaKnown RBP10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 LRRC19Q9H756 370 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 ZWILCHQ9H900 591 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 FAM86C1Q9NVL1 165 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 POLR3BQ9NW08 1133 aaPredicted RBP10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 WSB2Q9NYS7 404 aaPredicted RBP10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 BCCIPQ9P287 314 aaKnown RBP eCLIP10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 CTTNBP2NLQ9P2B4 639 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 VPS51Q9UID3 782 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 FZD4Q9ULV1 537 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 SNX10Q9Y5X0 201 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 KNL1Q8NG31 2342 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 NUMA1Q14980 2115 aa10.84□□□□□ -0.67
POLR2J3-213ENST00000508848 CEP250Q9BV73 2442 aa10.83□□□□□ -0.68
POLR2J3-213ENST00000508848 IGHV1OR15-9A0A0B4J2B8 117 aa10.83□□□□□ -0.68
POLR2J3-213ENST00000508848 GOLGA6L6A8MZA4 724 aa10.83□□□□□ -0.68
POLR2J3-213ENST00000508848 H3BRJ5 948 aa10.83□□□□□ -0.68
POLR2J3-213ENST00000508848 EEF2KO00418 725 aaKnown RBP10.83□□□□□ -0.68
POLR2J3-213ENST00000508848 PJA2O43164 708 aa10.83□□□□□ -0.68
POLR2J3-213ENST00000508848 SLC7A4O43246 635 aa10.83□□□□□ -0.68
POLR2J3-213ENST00000508848 SIN3BO75182 1162 aa10.83□□□□□ -0.68
POLR2J3-213ENST00000508848 EPN2O95208 641 aa10.83□□□□□ -0.68
POLR2J3-213ENST00000508848 IPO7O95373 1038 aaKnown RBP10.83□□□□□ -0.68
POLR2J3-213ENST00000508848 CD160O95971 181 aa10.83□□□□□ -0.68
POLR2J3-213ENST00000508848 ADH1BP00325 375 aa10.83□□□□□ -0.68
POLR2J3-213ENST00000508848 RARAP10276 462 aa10.83□□□□□ -0.68
POLR2J3-213ENST00000508848 SRCP12931 536 aa10.83□□□□□ -0.68
POLR2J3-213ENST00000508848 TGM1P22735 817 aa10.83□□□□□ -0.68
POLR2J3-213ENST00000508848 IL1R2P27930 398 aa10.83□□□□□ -0.68
POLR2J3-213ENST00000508848 CD6P30203 668 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms