RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 SLC16A3O15427 465 aaKnown RBP4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 ASAP2O43150 1006 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 USO1O60763 962 aaKnown RBP4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 HNRNPCL1O60812 293 aaKnown RBP4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 DTNBO60941 627 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 BMP15O95972 392 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 MYZAPP0CAP1 466 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 TYRP14679 529 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 ACADSP16219 412 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 ENGP17813 658 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 TCP1P17987 556 aaKnown RBP4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 TRIM21P19474 475 aaKnown RBP4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 CMA1P23946 247 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 CTGFP29279 349 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 KRT9P35527 623 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 PAFAH1B1P43034 410 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 NEK2P51955 445 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 MAP2K6P52564 334 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 ELF3P78545 371 aaPredicted RBP4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 MAPK7Q13164 816 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 BYSLQ13895 437 aaKnown RBP4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 KPNB1Q14974 876 aaKnown RBP4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 KRT72Q14CN4 511 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 STK38Q15208 465 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 PPP1R7Q15435 360 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 TAF11Q15544 211 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 GSTA3Q16772 222 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 ME3Q16798 604 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 AGBL2Q5U5Z8 902 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 IRGCQ6NXR0 463 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 KLC3Q6P597 504 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 NAPRTQ6XQN6 538 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 TRAPPC11Q7Z392 1133 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 ZNF804AQ7Z570 1209 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 CPLX4Q7Z7G2 160 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 TC2NQ8N9U0 490 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 ATP11CQ8NB49 1132 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 PCSK9Q8NBP7 692 aaKnown RBP4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 HVCN1Q96D96 273 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 STAMBPL1Q96FJ0 436 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 ZNF48Q96MX3 618 aaPredicted RBP4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 FCRL4Q96PJ5 515 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 KRT23Q9C075 422 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 SPATA7Q9P0W8 599 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 HESX1Q9UBX0 185 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 BARX2Q9UMQ3 279 aaPredicted RBP4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 ASB3Q9Y575 518 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 PCDHA1Q9Y5I3 950 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 WNK3Q9BYP7 1800 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 COL18A1P39060 1754 aa4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 CICQ96RK0 1608 aaPredicted RBP4.83□□□□□ -1.64
PDLIM5-211ENST00000508531 ADGRB1O14514 1584 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 C10orf71Q711Q0 1435 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 FRMD3A2A2Y4 597 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 CCT8L1PA6NM43 557 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 PRRT4C9JH25 899 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 O00370 1275 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 IPO5O00410 1097 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 DCLK1O15075 740 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 TRAPPC3O43617 180 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 TLR5O60602 858 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 PFDN1O60925 122 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 ALDH1L1O75891 902 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 IGKV2-30P06310 120 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 PYGLP06737 847 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 IL6RP08887 468 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 PARP1P09874 1014 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 PIM1P11309 404 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 EIF2S2P20042 333 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 ATP6V1C1P21283 382 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 RPS6KB1P23443 525 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 PCK1P35558 622 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 CYLC1P35663 651 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 RASSF2P50749 326 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 EIF3BP55884 814 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 RRS1Q15050 365 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 INAQ16352 499 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 DPCR1Q3MIW9 517 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 SLC9A4Q6AI14 798 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 SFRP4Q6FHJ7 346 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 NCAPH2Q6IBW4 605 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 HIBCHQ6NVY1 386 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 CCDC174Q6PII3 467 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 SLC2A7Q6PXP3 512 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 LAYNQ6UX15 382 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 OTUD6AQ7L8S5 288 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 WDR53Q7Z5U6 358 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 PRR18Q8N4B5 295 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 RNF10Q8N5U6 811 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 KCNH5Q8NCM2 988 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 DENND1AQ8TEH3 1009 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 EVI5LQ96CN4 794 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 FAM81BQ96LP2 452 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 CATSPER2Q96P56 530 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 GBP5Q96PP8 586 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 MACROD1Q9BQ69 325 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 PYM1Q9BRP8 204 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 CENPKQ9BS16 269 aa4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 MAK16Q9BXY0 300 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-211ENST00000508531 EIF2AQ9BY44 585 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms