RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 TBCBQ99426 244 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 PSMB7Q99436 277 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 CDC6Q99741 560 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 SIK2Q9H0K1 926 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 MUC3BQ9H195 1237 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 PDCL3Q9H2J4 239 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 WDCPQ9H6R7 721 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 TMPRSS4Q9NRS4 437 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 SLC25A13Q9UJS0 675 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 HS3ST2Q9Y278 367 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 SNX10Q9Y5X0 201 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 IGLV3-10A0A075B6K4 115 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 A0A1B0GTQ1 180 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 SLC7A4O43246 635 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 PLRG1O43660 514 aaKnown RBP13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 RTN2O75298 545 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 EEF1GP26641 437 aaKnown RBP13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 CD38P28907 300 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 NOMO3P69849 1222 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 SHBQ15464 509 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 DLG2Q15700 870 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 SLC25A52Q3SY17 297 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 ACCSLQ4AC99 568 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 CT47A1Q5JQC4 288 aaPredicted RBP13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 LRSAM1Q6UWE0 723 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 CCNI2Q6ZMN8 369 aaPredicted RBP13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 BNIPLQ7Z465 357 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 DSG4Q86SJ6 1040 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 ERICH1Q86X53 443 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 ELF4Q99607 663 aaPredicted RBP13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 GANQ9H2C0 597 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 AASDHPPTQ9NRN7 309 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 TAB2Q9NYJ8 693 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 ARHGAP20Q9P2F6 1191 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 VPS51Q9UID3 782 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 TMEM59LQ9UK28 342 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 RALYQ9UKM9 306 aaKnown RBP13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 PPM1HQ9ULR3 514 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 TPX2Q9ULW0 747 aaKnown RBP13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 ARID1BQ8NFD5 2236 aaPredicted RBP13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 CACNA1GO43497 2377 aa13.35□□□□□ -0.27
HMGCS1-205ENST00000508319 CHD5Q8TDI0 1954 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 TBC1D3DA0A087WVF3 549 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 TBC1D3IA0A087WXS9 549 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 TBC1D3EA0A087X179 549 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 TBC1D3KA0A087X1G2 549 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 TBC1D3FA6NER0 549 aaPredicted RBP13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 DRGXA6NNA5 263 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 TBC1D3LB9A6J9 549 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 TAF4O00268 1085 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 MCF2LO15068 1137 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 ALOX15BO15296 676 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 DFNA5O60443 496 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 SNAP91O60641 907 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 MT-CO1P00395 513 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 F9P00740 461 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 MMEP08473 750 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 TBC1D3HP0C7X1 549 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 SRCP12931 536 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 DEUP1Q05D60 604 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 SCAPQ12770 1279 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 CNTN1Q12860 1018 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 POM121L1PQ3SYA9 428 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 PRAMEF14Q5SWL7 426 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 CDKAL1Q5VV42 579 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 FAM46CQ5VWP2 391 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 NAA35Q5VZE5 725 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 TBC1D3GQ6DHY5 549 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 TBC1D3CQ6IPX1 549 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 CLEC17AQ6ZS10 378 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 PROSER1Q86XN7 944 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 TBC1D3Q8IZP1 549 aaPredicted RBP13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 PIP4K2CQ8TBX8 421 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 SLC20A1Q8WUM9 679 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 SERAC1Q96JX3 654 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 C2orf49Q9BVC5 232 aaPredicted RBP13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 STK33Q9BYT3 514 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 KDM4CQ9H3R0 1056 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 LMBRD1Q9NUN5 540 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 ZNF212Q9UDV6 495 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 NOCTQ9UK39 431 aaKnown RBP13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 PAXBP1Q9Y5B6 917 aa13.34□□□□□ -0.27
HMGCS1-205ENST00000508319 A0A0D9SEW6 157 aa13.33□□□□□ -0.28
HMGCS1-205ENST00000508319 GOLGA8CPA6NN73 597 aa13.33□□□□□ -0.28
HMGCS1-205ENST00000508319 E9PAM4 449 aa13.33□□□□□ -0.28
HMGCS1-205ENST00000508319 C1QTNF3-AMACRE9PGA6 284 aa13.33□□□□□ -0.28
HMGCS1-205ENST00000508319 GOLGA8SH3BPF8 625 aa13.33□□□□□ -0.28
HMGCS1-205ENST00000508319 K7ERQ8 282 aa13.33□□□□□ -0.28
HMGCS1-205ENST00000508319 TNFSF14O43557 240 aa13.33□□□□□ -0.28
HMGCS1-205ENST00000508319 CTSLP07711 333 aa13.33□□□□□ -0.28
HMGCS1-205ENST00000508319 RHOCP08134 193 aa13.33□□□□□ -0.28
HMGCS1-205ENST00000508319 RRM1P23921 792 aa13.33□□□□□ -0.28
HMGCS1-205ENST00000508319 MAT2AP31153 395 aaKnown RBP13.33□□□□□ -0.28
HMGCS1-205ENST00000508319 KLK7P49862 253 aa13.33□□□□□ -0.28
HMGCS1-205ENST00000508319 NXPH1P58417 271 aa13.33□□□□□ -0.28
HMGCS1-205ENST00000508319 TAS2R38P59533 333 aa13.33□□□□□ -0.28
HMGCS1-205ENST00000508319 KRT31Q15323 416 aa13.33□□□□□ -0.28
HMGCS1-205ENST00000508319 PIP5KL1Q5T9C9 394 aa13.33□□□□□ -0.28
HMGCS1-205ENST00000508319 NAPEPLDQ6IQ20 393 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms