RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 ACCSLQ4AC99 568 aa20.37■□□□□ 0.85
SFXN1-209ENST00000508290 STPG1Q5TH74 334 aa20.37■□□□□ 0.85
SFXN1-209ENST00000508290 RWDD4Q6NW29 188 aaKnown RBP20.37■□□□□ 0.85
SFXN1-209ENST00000508290 CACUL1Q86Y37 369 aa20.37■□□□□ 0.85
SFXN1-209ENST00000508290 PSTKQ8IV42 348 aaKnown RBP20.37■□□□□ 0.85
SFXN1-209ENST00000508290 CCDC185Q8N715 623 aa20.37■□□□□ 0.85
SFXN1-209ENST00000508290 CEP44Q9C0F1 390 aa20.37■□□□□ 0.85
SFXN1-209ENST00000508290 CD93Q9NPY3 652 aa20.37■□□□□ 0.85
SFXN1-209ENST00000508290 CNOT8Q9UFF9 292 aaKnown RBP20.37■□□□□ 0.85
SFXN1-209ENST00000508290 ADAMTS1Q9UHI8 967 aa20.37■□□□□ 0.85
SFXN1-209ENST00000508290 VPS51Q9UID3 782 aa20.37■□□□□ 0.85
SFXN1-209ENST00000508290 SNX10Q9Y5X0 201 aa20.37■□□□□ 0.85
SFXN1-209ENST00000508290 THADAQ6YHU6 1953 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 TMEM191CA6NGB0 347 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 C1QTNF3-AMACRE9PGA6 284 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 MCF2LO15068 1137 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 FGF10O15520 208 aaPredicted RBP20.36■□□□□ 0.85
SFXN1-209ENST00000508290 SEMA4FO95754 770 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 SYPP08247 313 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 PSMA2P25787 234 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 HNRNPH3P31942 346 aaKnown RBP20.36■□□□□ 0.85
SFXN1-209ENST00000508290 SLC8A1P32418 973 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 GFPT1Q06210 699 aaPredicted RBP20.36■□□□□ 0.85
SFXN1-209ENST00000508290 CCDC15Q0P6D6 951 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 NFKBIBQ15653 356 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 DLG2Q15700 870 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 ARTNQ5T4W7 220 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 DAB2IPQ5VWQ8 1189 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 SCYL2Q6P3W7 929 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 ATP11CQ8NB49 1132 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 ZNF653Q96CK0 615 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 FAM129BQ96TA1 746 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 PSMB7Q99436 277 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 OMDQ99983 421 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.36■□□□□ 0.85
SFXN1-209ENST00000508290 ZDHHC5Q9C0B5 715 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 MAGEH1Q9H213 219 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 CATSPERBQ9H7T0 1116 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 ATP13A1Q9HD20 1204 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 TMEM9BQ9NQ34 198 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 TMEM74BQ9NUR3 256 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 FBXL12Q9NXK8 326 aa20.36■□□□□ 0.85
SFXN1-209ENST00000508290 SLC7A4O43246 635 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 GDF9O60383 454 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 CFIP05156 583 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 SKILP12757 684 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 SRCP12931 536 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 GOT1P17174 413 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 TCEAL6Q6IPX3 200 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 NLRP14Q86W24 1093 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 MMAAQ8IVH4 418 aaKnown RBP20.35■□□□□ 0.85
SFXN1-209ENST00000508290 STK40Q8N2I9 435 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 GANCQ8TET4 914 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 CPLX3Q8WVH0 158 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 TCEAL3Q969E4 200 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 KDM4CQ9H3R0 1056 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 SMOC1Q9H4F8 434 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 MTG2Q9H4K7 406 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 CAPN10Q9HC96 672 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 OSGEPQ9NPF4 335 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 FZD10Q9ULW2 581 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 HPCAL4Q9UM19 191 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 ABCA7Q8IZY2 2146 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 DMXL1Q9Y485 3027 aa20.35■□□□□ 0.85
SFXN1-209ENST00000508290 A0A0D9SEW6 157 aa20.34■□□□□ 0.85
SFXN1-209ENST00000508290 A0A1B0GTW7 788 aa20.34■□□□□ 0.85
SFXN1-209ENST00000508290 ZSCAN5CA6NGD5 496 aaPredicted RBP20.34■□□□□ 0.85
SFXN1-209ENST00000508290 LRRC72A6NJI9 287 aa20.34■□□□□ 0.85
SFXN1-209ENST00000508290 RAMP2O60895 175 aa20.34■□□□□ 0.85
SFXN1-209ENST00000508290 IL1BP01584 269 aa20.34■□□□□ 0.85
SFXN1-209ENST00000508290 EPHB2P29323 1055 aa20.34■□□□□ 0.85
SFXN1-209ENST00000508290 CASP14P31944 242 aa20.34■□□□□ 0.85
SFXN1-209ENST00000508290 ACSL1P33121 698 aa20.34■□□□□ 0.85
SFXN1-209ENST00000508290 RECQLP46063 649 aaPredicted RBP20.34■□□□□ 0.85
SFXN1-209ENST00000508290 ATXN3P54252 364 aaPredicted RBP20.34■□□□□ 0.85
SFXN1-209ENST00000508290 YBEYP58557 167 aaPredicted RBP20.34■□□□□ 0.85
SFXN1-209ENST00000508290 IRX4P78413 519 aa20.34■□□□□ 0.85
SFXN1-209ENST00000508290 TSR1Q2NL82 804 aaKnown RBP20.34■□□□□ 0.85
SFXN1-209ENST00000508290 RAB6CQ53S08 254 aa20.34■□□□□ 0.85
SFXN1-209ENST00000508290 DCAF12L1Q5VU92 463 aa20.34■□□□□ 0.85
SFXN1-209ENST00000508290 FAM124AQ86V42 546 aa20.34■□□□□ 0.85
SFXN1-209ENST00000508290 SPON2Q9BUD6 331 aa20.34■□□□□ 0.85
SFXN1-209ENST00000508290 ACE2Q9BYF1 805 aaPredicted RBP20.34■□□□□ 0.85
SFXN1-209ENST00000508290 RAB6CQ9H0N0 254 aa20.34■□□□□ 0.85
SFXN1-209ENST00000508290 ZNHIT6Q9NWK9 470 aaKnown RBP20.34■□□□□ 0.85
SFXN1-209ENST00000508290 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.34■□□□□ 0.85
SFXN1-209ENST00000508290 ATXN2Q99700 1313 aaKnown RBP20.33■□□□□ 0.85
SFXN1-209ENST00000508290 RALGAPA1Q6GYQ0 2036 aa20.33■□□□□ 0.85
SFXN1-209ENST00000508290 TNRC6BQ9UPQ9 1833 aaKnown RBP20.33■□□□□ 0.85
SFXN1-209ENST00000508290 WASH4PA8MWX3 477 aa20.33■□□□□ 0.85
SFXN1-209ENST00000508290 PATE3B3GLJ2 98 aa20.33■□□□□ 0.85
SFXN1-209ENST00000508290 CBX4O00257 560 aa20.33■□□□□ 0.85
SFXN1-209ENST00000508290 MID1O15344 667 aa20.33■□□□□ 0.85
SFXN1-209ENST00000508290 RNASEH2AO75792 299 aaKnown RBP20.33■□□□□ 0.85
SFXN1-209ENST00000508290 PSMD8P48556 350 aa20.33■□□□□ 0.85
SFXN1-209ENST00000508290 SERPINH1P50454 418 aaKnown RBP20.33■□□□□ 0.85
SFXN1-209ENST00000508290 PLPP6Q8IY26 295 aa20.33■□□□□ 0.85
SFXN1-209ENST00000508290 DEFB119Q8N690 84 aa20.33■□□□□ 0.85
SFXN1-209ENST00000508290 PCDH20Q8N6Y1 951 aaKnown RBP20.33■□□□□ 0.85
SFXN1-209ENST00000508290 RTL3Q8N8U3 475 aaKnown RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms