RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 PDHA1P08559 390 aa14.79□□□□□ -0.04
DDX41-208ENST00000507955 FGF3P11487 239 aaPredicted RBP14.79□□□□□ -0.04
DDX41-208ENST00000507955 CCNHP51946 323 aaPredicted RBP14.79□□□□□ -0.04
DDX41-208ENST00000507955 ITGA7Q13683 1181 aa14.79□□□□□ -0.04
DDX41-208ENST00000507955 RCN1Q15293 331 aa14.79□□□□□ -0.04
DDX41-208ENST00000507955 NOMO2Q5JPE7 1267 aa14.79□□□□□ -0.04
DDX41-208ENST00000507955 ATG16L1Q676U5 607 aa14.79□□□□□ -0.04
DDX41-208ENST00000507955 TIFABQ6ZNK6 161 aa14.79□□□□□ -0.04
DDX41-208ENST00000507955 SPATA2LQ8IUW3 424 aaPredicted RBP14.79□□□□□ -0.04
DDX41-208ENST00000507955 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.79□□□□□ -0.04
DDX41-208ENST00000507955 FCRL2Q96LA5 508 aaPredicted RBP14.79□□□□□ -0.04
DDX41-208ENST00000507955 RILPQ96NA2 401 aa14.79□□□□□ -0.04
DDX41-208ENST00000507955 UPF3AQ9H1J1 476 aaKnown RBP14.79□□□□□ -0.04
DDX41-208ENST00000507955 DCLRE1BQ9H816 532 aa14.79□□□□□ -0.04
DDX41-208ENST00000507955 LRRC40Q9H9A6 602 aa14.79□□□□□ -0.04
DDX41-208ENST00000507955 CASS4Q9NQ75 786 aa14.79□□□□□ -0.04
DDX41-208ENST00000507955 PNPOQ9NVS9 261 aa14.79□□□□□ -0.04
DDX41-208ENST00000507955 NMRK1Q9NWW6 199 aa14.79□□□□□ -0.04
DDX41-208ENST00000507955 CPSF2Q9P2I0 782 aaKnown RBP14.79□□□□□ -0.04
DDX41-208ENST00000507955 HCSTQ9UBK5 93 aa14.79□□□□□ -0.04
DDX41-208ENST00000507955 CORO1CQ9ULV4 474 aaPredicted RBP14.79□□□□□ -0.04
DDX41-208ENST00000507955 HBS1LQ9Y450 684 aaKnown RBP14.79□□□□□ -0.04
DDX41-208ENST00000507955 A0A1W2PQH9 124 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 CCDC189A1A4V9 331 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 M0QZQ0 153 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 GYG2O15488 501 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 CA12O43570 354 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 SNNO75324 88 aaPredicted RBP14.78□□□□□ -0.04
DDX41-208ENST00000507955 FAM163BP0C2L3 166 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 HCAR3P49019 387 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 YWHAHQ04917 246 aaPredicted RBP14.78□□□□□ -0.04
DDX41-208ENST00000507955 KDSRQ06136 332 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 MBTPS1Q14703 1052 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 POU6F1Q14863 301 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 TEDDM1Q5T9Z0 273 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 BTBD8Q5XKL5 378 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 CYS1Q717R9 158 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 TMEM135Q86UB9 458 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.78□□□□□ -0.04
DDX41-208ENST00000507955 IPMKQ8NFU5 416 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 SH3TC2Q8TF17 1288 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 C7orf26Q96N11 449 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 ANKRD27Q96NW4 1050 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 SLC39A8Q9C0K1 460 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 DNAJC16Q9Y2G8 782 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 LIN7AO14910 233 aaPredicted RBP14.78□□□□□ -0.04
DDX41-208ENST00000507955 MAP3K13O43283 966 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 TBX18O95935 607 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 AVPR1AP37288 418 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 USP46P62068 366 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 GRIK3Q13003 919 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 CCSAPQ6IQ19 270 aaPredicted RBP14.78□□□□□ -0.04
DDX41-208ENST00000507955 DCLRE1AQ6PJP8 1040 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 CRLF3Q8IUI8 442 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 ARHGAP12Q8IWW6 846 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 DPF3Q92784 378 aa14.78□□□□□ -0.04
DDX41-208ENST00000507955 RPL26L1Q9UNX3 145 aaKnown RBP14.78□□□□□ -0.04
DDX41-208ENST00000507955 DPPA5A6NC42 116 aa14.77□□□□□ -0.04
DDX41-208ENST00000507955 IRAK2O43187 625 aa14.77□□□□□ -0.04
DDX41-208ENST00000507955 HNRNPCL1O60812 293 aaKnown RBP14.77□□□□□ -0.04
DDX41-208ENST00000507955 CYP11A1P05108 521 aa14.77□□□□□ -0.04
DDX41-208ENST00000507955 ESRRAP11474 423 aaPredicted RBP14.77□□□□□ -0.04
DDX41-208ENST00000507955 GP5P40197 560 aa14.77□□□□□ -0.04
DDX41-208ENST00000507955 OR1G1P47890 313 aa14.77□□□□□ -0.04
DDX41-208ENST00000507955 SLC1A6P48664 564 aa14.77□□□□□ -0.04
DDX41-208ENST00000507955 AIF1P55008 147 aa14.77□□□□□ -0.04
DDX41-208ENST00000507955 ITGA9Q13797 1035 aa14.77□□□□□ -0.04
DDX41-208ENST00000507955 TFAP2DQ7Z6R9 452 aa14.77□□□□□ -0.04
DDX41-208ENST00000507955 KCNMB4Q86W47 210 aa14.77□□□□□ -0.04
DDX41-208ENST00000507955 SPATA6LQ8N4H0 392 aa14.77□□□□□ -0.04
DDX41-208ENST00000507955 ZNF333Q96JL9 665 aa14.77□□□□□ -0.04
DDX41-208ENST00000507955 SHCBP1LQ9BZQ2 653 aa14.77□□□□□ -0.04
DDX41-208ENST00000507955 MKS1Q9NXB0 559 aa14.77□□□□□ -0.04
DDX41-208ENST00000507955 TNFRSF10BO14763 440 aa14.77□□□□□ -0.05
DDX41-208ENST00000507955 PMPCBO75439 489 aa14.77□□□□□ -0.05
DDX41-208ENST00000507955 LUC7L3O95232 432 aaKnown RBP14.77□□□□□ -0.05
DDX41-208ENST00000507955 CHRNA4P43681 627 aa14.77□□□□□ -0.05
DDX41-208ENST00000507955 ARPP19P56211 112 aa14.77□□□□□ -0.05
DDX41-208ENST00000507955 TSPY1Q01534 308 aa14.77□□□□□ -0.05
DDX41-208ENST00000507955 ZNF460Q14592 562 aa14.77□□□□□ -0.05
DDX41-208ENST00000507955 CLLU1OSQ5K130 101 aa14.77□□□□□ -0.05
DDX41-208ENST00000507955 SPANXN3Q5MJ09 141 aa14.77□□□□□ -0.05
DDX41-208ENST00000507955 ARTNQ5T4W7 220 aa14.77□□□□□ -0.05
DDX41-208ENST00000507955 SHKBP1Q8TBC3 707 aa14.77□□□□□ -0.05
DDX41-208ENST00000507955 DTX3LQ8TDB6 740 aa14.77□□□□□ -0.05
DDX41-208ENST00000507955 DNAJC9Q8WXX5 260 aa14.77□□□□□ -0.05
DDX41-208ENST00000507955 RBBP8Q99708 897 aa14.77□□□□□ -0.05
DDX41-208ENST00000507955 FTHL17Q9BXU8 183 aa14.77□□□□□ -0.05
DDX41-208ENST00000507955 SLC2A6Q9UGQ3 507 aa14.77□□□□□ -0.05
DDX41-208ENST00000507955 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.77□□□□□ -0.05
DDX41-208ENST00000507955 NCAM2O15394 837 aa14.76□□□□□ -0.05
DDX41-208ENST00000507955 TBX10O75333 385 aa14.76□□□□□ -0.05
DDX41-208ENST00000507955 PROCP04070 461 aa14.76□□□□□ -0.05
DDX41-208ENST00000507955 MX2P20592 715 aa14.76□□□□□ -0.05
DDX41-208ENST00000507955 SERPINB6P35237 376 aa14.76□□□□□ -0.05
DDX41-208ENST00000507955 PBX3P40426 434 aa14.76□□□□□ -0.05
DDX41-208ENST00000507955 CCR10P46092 362 aa14.76□□□□□ -0.05
DDX41-208ENST00000507955 INHBEP58166 350 aa14.76□□□□□ -0.05
DDX41-208ENST00000507955 CTBP1Q13363 440 aa14.76□□□□□ -0.05
DDX41-208ENST00000507955 KRT72Q14CN4 511 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms