RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 BRMS1LQ5PSV4 323 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 AGBL4Q5VU57 503 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 FAM46CQ5VWP2 391 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 SMYD5Q6GMV2 418 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 ZDHHC17Q8IUH5 632 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 FAM114A1Q8IWE2 563 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 FAM71AQ8IYT1 594 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 SH2D3CQ8N5H7 860 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 SAP25Q8TEE9 199 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 CNDP2Q96KP4 475 aaKnown RBP11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 PSMB7Q99436 277 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 TKTL2Q9H0I9 626 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 PDCL3Q9H2J4 239 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 KDM4CQ9H3R0 1056 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 NDST4Q9H3R1 872 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 ARHGEF38Q9NXL2 777 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 RRN3Q9NYV6 651 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 PPM1HQ9ULR3 514 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 STAP1Q9ULZ2 295 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 TBC1D30Q9Y2I9 924 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 RAXQ9Y2V3 346 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 FHOD1Q9Y613 1164 aa11.85□□□□□ -0.51
HMGCS1-204ENST00000507293 CACNA1GO43497 2377 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 TDRD6O60522 2096 aaKnown RBP11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 TRABD2BA6NFA1 517 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 MCF2LO15068 1137 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 SNAP91O60641 907 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 SRCP12931 536 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 PRKCSHP14314 528 aaPredicted RBP11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 ZNF18P17022 549 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 CDH5P33151 784 aaPredicted RBP11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 CXCR3P49682 368 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 BPIFB4P59827 614 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 DEUP1Q05D60 604 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 CYP4F3Q08477 520 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 DNAJC3Q13217 504 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 CAMK2BQ13554 666 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 DRAP1Q14919 205 aaPredicted RBP11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 COL28A1Q2UY09 1125 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 DPCR1Q3MIW9 517 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 VWA3BQ502W6 1294 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 HSP90AA4PQ58FG1 418 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 FAM102AQ5T9C2 384 aaPredicted RBP11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 DPY19L2P1Q6NXN4 242 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 TRIM69Q86WT6 500 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 SPATS2Q86XZ4 545 aaKnown RBP11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 ZNF683Q8IZ20 524 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 OXR1Q8N573 874 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 EID2Q8N6I1 236 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 MFSD2AQ8NA29 543 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 TMEM35BQ8NCS4 154 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 TBCBQ99426 244 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 CLSTN2Q9H4D0 955 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 WDCPQ9H6R7 721 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 ERVMER34-1Q9H9K5 563 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 TMPRSS4Q9NRS4 437 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 ARHGAP20Q9P2F6 1191 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 VPS51Q9UID3 782 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 DMTF1Q9Y222 760 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 HS3ST2Q9Y278 367 aa11.84□□□□□ -0.51
HMGCS1-204ENST00000507293 ZFYVE26Q68DK2 2539 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 K7ERQ8 282 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 RFPL3O75679 317 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 MT-CO1P00395 513 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 CTSLP07711 333 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 CYP11B1P15538 503 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 NUDT1P36639 197 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 SCNN1AP37088 669 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 ACADVLP49748 655 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 CLDN6P56747 220 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 TAS2R38P59533 333 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 KRT83P78385 493 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 KCNMA1Q12791 1236 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 BNIP3Q12983 259 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 TAF3Q5VWG9 929 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 TFAP2DQ7Z6R9 452 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 XYLT1Q86Y38 959 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 DCAF4L2Q8NA75 395 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 ATP11CQ8NB49 1132 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 NT5C3BQ969T7 300 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 C18orf8Q96DM3 657 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 PGAP3Q96FM1 320 aaPredicted RBP11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 MYOCQ99972 504 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 TUBGCP2Q9BSJ2 902 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 C2orf49Q9BVC5 232 aaPredicted RBP11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 PREBQ9HCU5 417 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 MPP6Q9NZW5 540 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 DKK4Q9UBT3 224 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 CA5BQ9Y2D0 317 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 PCDHGA1Q9Y5H4 931 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 ASPMQ8IZT6 3477 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 APC2O95996 2303 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 CHD5Q8TDI0 1954 aa11.83□□□□□ -0.52
HMGCS1-204ENST00000507293 ZZEF1O43149 2961 aa11.82□□□□□ -0.52
HMGCS1-204ENST00000507293 SPEGQ15772 3267 aa11.82□□□□□ -0.52
HMGCS1-204ENST00000507293 ACACAQ13085 2346 aa11.82□□□□□ -0.52
HMGCS1-204ENST00000507293 ARID1BQ8NFD5 2236 aaPredicted RBP11.82□□□□□ -0.52
HMGCS1-204ENST00000507293 ANKRD11Q6UB99 2663 aaPredicted RBP11.82□□□□□ -0.52
HMGCS1-204ENST00000507293 PRAMEF26H0Y7S4 382 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms