RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 TBC1D3Q8IZP1 549 aaPredicted RBP14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 GALNT15Q8N3T1 639 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 CHCHD4Q8N4Q1 142 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 AADATQ8N5Z0 425 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 MFSD2AQ8NA29 543 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 CAMK1GQ96NX5 476 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 ELF4Q99607 663 aaPredicted RBP14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 ERVMER34-1Q9H9K5 563 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 PREBQ9HCU5 417 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 DYRK4Q9NR20 520 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 LMBRD1Q9NUN5 540 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 ANO10Q9NW15 660 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 SERGEFQ9UGK8 458 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 ZMIZ1Q9ULJ6 1067 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 PPM1HQ9ULR3 514 aa14.8□□□□□ -0.04
HMGCS1-203ENST00000507004 ILVBLA1L0T0 632 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 PLRG1O43660 514 aaKnown RBP14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 KRT37O76014 449 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 ADCY5O95622 1261 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 CCDC172P0C7W6 258 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 PNMA6AP0CW24 399 aaPredicted RBP14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 SPINK2P20155 84 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 OR1E1P30953 314 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 DRD3P35462 400 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 SOX5P35711 763 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 SETMARQ53H47 684 aaPredicted RBP14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 HSP90AA4PQ58FG1 418 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 OTUD1Q5VV17 481 aaPredicted RBP14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 TAF3Q5VWG9 929 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 BNIPLQ7Z465 357 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 NOP9Q86U38 636 aaKnown RBP14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 ATP11CQ8NB49 1132 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 TMIEQ8NEW7 156 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 FAM174AQ8TBP5 190 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 PIP4K2CQ8TBX8 421 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 ZCCHC14Q8WYQ9 949 aaKnown RBP14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 PPP1R16AQ96I34 528 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 SERAC1Q96JX3 654 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 SLC6A18Q96N87 628 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 TBCBQ99426 244 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 ZYG11BQ9C0D3 744 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 CEP44Q9C0F1 390 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 TAB2Q9NYJ8 693 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 PPARGC1AQ9UBK2 798 aaKnown RBP14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 TMEM59LQ9UK28 342 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 KLK13Q9UKR3 277 aa14.79□□□□□ -0.04
HMGCS1-203ENST00000507004 CEP295Q9C0D2 2601 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 E9PAM4 449 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 H0Y8X5 98 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 DKK1O94907 266 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 ENDOD1O94919 500 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 TOP3BO95985 862 aaKnown RBP14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 CYP1A1P04798 512 aaPredicted RBP14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 SRCP12931 536 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 DESP17661 470 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 MMP8P22894 467 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 SDC4P31431 198 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 FLT3P36888 993 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 GEMIN4P57678 1058 aaKnown RBP14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 NRG1Q02297 640 aaPredicted RBP14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 KRT31Q15323 416 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 SYCP1Q15431 976 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 NAA35Q5VZE5 725 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 PPP1R2P3Q6NXS1 205 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 STRADAQ7RTN6 431 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 C14orf80Q86SX3 495 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 ZNF683Q8IZ20 524 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 VPS16Q9H269 839 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 GANQ9H2C0 597 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 PCDHGA1Q9Y5H4 931 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 LAMA1P25391 3075 aa14.78□□□□□ -0.04
HMGCS1-203ENST00000507004 KMT2BQ9UMN6 2715 aaPredicted RBP14.77□□□□□ -0.04
HMGCS1-203ENST00000507004 A0A1W2PR77 199 aa14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 PRAMEF26H0Y7S4 382 aa14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 GOLGA8SH3BPF8 625 aa14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 TLR4O00206 839 aa14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 MBD3O95983 291 aa14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 ITGAVP06756 1048 aa14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 MMEP08473 750 aa14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 C1SP09871 688 aa14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 CHRNA3P32297 505 aa14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 RXRGP48443 463 aa14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 GSCP56915 257 aaPredicted RBP14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 POLR2FP61218 127 aaKnown RBP14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 MYL5Q02045 173 aa14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 STAT4Q14765 748 aa14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 ALFQ53S48 1182 aa14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 CCNI2Q6ZMN8 369 aaPredicted RBP14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 Q6ZVU0 165 aa14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 TMPRSS7Q7RTY8 843 aa14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 PCDH20Q8N6Y1 951 aaKnown RBP14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 NEK11Q8NG66 645 aa14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 FTSJ1Q9UET6 329 aa14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 VPS51Q9UID3 782 aa14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 NOCTQ9UK39 431 aaKnown RBP14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 SLCO1B1Q9Y6L6 691 aa14.77□□□□□ -0.05
HMGCS1-203ENST00000507004 CNTN5O94779 1100 aa14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 GFPT2O94808 682 aa14.76□□□□□ -0.05
HMGCS1-203ENST00000507004 CALB1P05937 261 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms