RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 SRCP12931 536 aa18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 RPS14P62263 151 aaKnown RBP18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 KRT83P78385 493 aa18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 ARF5P84085 180 aa18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 DPYSL2Q16555 572 aa18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 PPP6R3Q5H9R7 873 aaPredicted RBP18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 PMS2CLQ68D20 193 aa18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 LAIR1Q6GTX8 287 aa18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 METTL3Q86U44 580 aaKnown RBP18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 TMEM139Q8IV31 216 aa18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 RFFLQ8WZ73 363 aa18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 HSPH1Q92598 858 aa18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 SPACA7Q96KW9 195 aa18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 RSPH9Q9H1X1 276 aaPredicted RBP18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 CATSPERBQ9H7T0 1116 aa18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 FBRSQ9HAH7 460 aa18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 CWC15Q9P013 229 aaKnown RBP18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 INTUQ9ULD6 942 aa18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 TFR2Q9UP52 801 aa18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 ACTL7AQ9Y615 435 aa18.67■□□□□ 0.58
PDLIM7-216ENST00000506537 EP300Q09472 2414 aaPredicted RBP18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 TARSL2A2RTX5 802 aaKnown RBP18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 CBX4O00257 560 aa18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 SMAD6O43541 496 aaKnown RBP18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 RAMP2O60895 175 aa18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 CD160O95971 181 aa18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 TAS2R40P59535 323 aa18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 DPYSQ14117 519 aa18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 DLG2Q15700 870 aa18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 BOLA3Q53S33 107 aa18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 RAD9BQ6WBX8 426 aa18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 RFX8Q6ZV50 586 aa18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 Q6ZVU0 165 aa18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 TEKT4Q8WW24 435 aa18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 PRCCQ92733 491 aaPredicted RBP18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 FAM129BQ96TA1 746 aa18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 KLC2Q9H0B6 622 aa18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 MAGEH1Q9H213 219 aa18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 IMPACTQ9P2X3 320 aa18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 RAB23Q9ULC3 237 aa18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 GVINP1Q7Z2Y8 2422 aa18.66■□□□□ 0.58
PDLIM7-216ENST00000506537 TMEM110-MUSTN1A8MSY1 372 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 ZNF217O75362 1048 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 MAN1A1P33908 653 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 CYLC1P35663 651 aaPredicted RBP18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 NNMTP40261 264 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 MAGEA1P43355 309 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 TPMTP51580 245 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 POLD3Q15054 466 aaPredicted RBP18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 TCEAL1Q15170 157 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 ZNF776Q68DI1 518 aaPredicted RBP18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 IL31Q6EBC2 164 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 POLNQ7Z5Q5 900 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 TMTC1Q8IUR5 882 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 RHOT2Q8IXI1 618 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 UMODL1-AS1Q8N2C9 162 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 STK40Q8N2I9 435 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 DCLK2Q8N568 766 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 ATP11CQ8NB49 1132 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 HMCESQ96FZ2 354 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 PCDH18Q9HCL0 1135 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 ITM2CQ9NQX7 267 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 REXO2Q9Y3B8 237 aaKnown RBP18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 MFHAS1Q9Y4C4 1052 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 FAM186AA6NE01 2351 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 SDK1Q7Z5N4 2213 aa18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 TNRC6BQ9UPQ9 1833 aaKnown RBP18.65■□□□□ 0.58
PDLIM7-216ENST00000506537 THADAQ6YHU6 1953 aa18.64■□□□□ 0.58
PDLIM7-216ENST00000506537 CFAP54Q96N23 3096 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 RASA4BC9J798 803 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 RASA4O43374 803 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 ZNF821O75541 412 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 NDUFA10O95299 355 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 IGLV3-19P01714 112 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 ERCC2P18074 760 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 GJC1P36383 396 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 ETFBP38117 255 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 SSR1P43307 286 aaKnown RBP18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 HCAR3P49019 387 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 SERPINH1P50454 418 aaKnown RBP18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 ARSEP51690 589 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 BYSLQ13895 437 aaKnown RBP18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 MESDQ14696 234 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 ACCSLQ4AC99 568 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 ATP13A4Q4VNC1 1196 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 C22orf39Q6P5X5 142 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 C11orf74Q86VG3 221 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 NPWQ8N729 165 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 TSC1Q92574 1164 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 RUBCNQ92622 972 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 LRRC19Q9H756 370 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 NCDNQ9UBB6 729 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 PCDHA13Q9Y5I0 950 aa18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 EPN1Q9Y6I3 576 aaPredicted RBP18.64■□□□□ 0.57
PDLIM7-216ENST00000506537 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 RCCD1A6NED2 376 aa18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 EPN2O95208 641 aa18.63■□□□□ 0.57
PDLIM7-216ENST00000506537 CD48P09326 243 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms