RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 PANX2Q96RD6 677 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 EIF3CQ99613 913 aaKnown RBP7.46□□□□□ -1.22
GYPB-206ENST00000506516 FEM1AQ9BSK4 669 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 C2orf49Q9BVC5 232 aaPredicted RBP7.46□□□□□ -1.22
GYPB-206ENST00000506516 RAB6CQ9H0N0 254 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 CATSPERBQ9H7T0 1116 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 LUC7LQ9NQ29 371 aaKnown RBP7.46□□□□□ -1.22
GYPB-206ENST00000506516 TMPRSS4Q9NRS4 437 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 MPP6Q9NZW5 540 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 CTTNBP2NLQ9P2B4 639 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 PCSK1NQ9UHG2 260 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 SLC25A13Q9UJS0 675 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 ANAPC7Q9UJX3 599 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 VPS28Q9UK41 221 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 INTS6Q9UL03 887 aaKnown RBP7.46□□□□□ -1.22
GYPB-206ENST00000506516 FZD10Q9ULW2 581 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 HPCAL4Q9UM19 191 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 USP18Q9UMW8 372 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 ERVW-1Q9UQF0 538 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 RAD54BQ9Y620 910 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 KMT2EQ8IZD2 1858 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 MIA3Q5JRA6 1907 aa7.46□□□□□ -1.22
GYPB-206ENST00000506516 TARSL2A2RTX5 802 aaKnown RBP7.45□□□□□ -1.22
GYPB-206ENST00000506516 DAPK3O43293 454 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 CREB3O43889 395 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 RNASEH1O60930 286 aaKnown RBP7.45□□□□□ -1.22
GYPB-206ENST00000506516 ZNF217O75362 1048 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 RPP40O75818 363 aaKnown RBP7.45□□□□□ -1.22
GYPB-206ENST00000506516 RHOBTB1O94844 696 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 LRIG2O94898 1065 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 ACADMP11310 421 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 RHOQP17081 205 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 MZF1P28698 734 aaPredicted RBP7.45□□□□□ -1.22
GYPB-206ENST00000506516 EPHB2P29323 1055 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 CDC25BP30305 580 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 SSR1P43307 286 aaKnown RBP7.45□□□□□ -1.22
GYPB-206ENST00000506516 MAGEA1P43355 309 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 MAPKAPK2P49137 400 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 ZNF135P52742 658 aaPredicted RBP7.45□□□□□ -1.22
GYPB-206ENST00000506516 SLC20A2Q08357 652 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 SFSWAPQ12872 951 aaKnown RBP7.45□□□□□ -1.22
GYPB-206ENST00000506516 FUT11Q495W5 492 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 ACCSLQ4AC99 568 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 CXorf57Q6NSI4 855 aaKnown RBP7.45□□□□□ -1.22
GYPB-206ENST00000506516 RETSATQ6NUM9 610 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 KIAA1211LQ6NV74 962 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 PRR23BQ6ZRT6 265 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.45□□□□□ -1.22
GYPB-206ENST00000506516 TMPRSS6Q8IU80 811 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 RHOT2Q8IXI1 618 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 CCDC116Q8IYX3 515 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 MDGA1Q8NFP4 955 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 ZNF564Q8TBZ8 553 aaPredicted RBP7.45□□□□□ -1.22
GYPB-206ENST00000506516 PRCCQ92733 491 aaPredicted RBP7.45□□□□□ -1.22
GYPB-206ENST00000506516 ARHGEF26Q96DR7 871 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 SIPA1Q96FS4 1042 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 SPACA7Q96KW9 195 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 RPL10LQ96L21 214 aaKnown RBP7.45□□□□□ -1.22
GYPB-206ENST00000506516 SPON2Q9BUD6 331 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 TPSD1Q9BZJ3 242 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 TRIM7Q9C029 511 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 EPC1Q9H2F5 836 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 TMEM245Q9H330 911 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 DHX35Q9H5Z1 703 aaKnown RBP7.45□□□□□ -1.22
GYPB-206ENST00000506516 ZWILCHQ9H900 591 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 FBRSQ9HAH7 460 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 PRDM16Q9HAZ2 1276 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 ATP13A1Q9HD20 1204 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 SPTLC3Q9NUV7 552 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 INTUQ9ULD6 942 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 NENFQ9UMX5 172 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 AP4E1Q9UPM8 1137 aa7.45□□□□□ -1.22
GYPB-206ENST00000506516 CXorf51AA0A1B0GTR3 108 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 FAM72CH0Y354 149 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 EEF2KO00418 725 aaKnown RBP7.44□□□□□ -1.22
GYPB-206ENST00000506516 FGF10O15520 208 aaPredicted RBP7.44□□□□□ -1.22
GYPB-206ENST00000506516 RAMP2O60895 175 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 LRCH4O75427 683 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 HLA-EP13747 358 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 GABRG2P18507 467 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 PRKCHP24723 683 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 OXTRP30559 389 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 HOXC13P31276 330 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 ARHGAP25P42331 645 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 CTSOP43234 321 aaPredicted RBP7.44□□□□□ -1.22
GYPB-206ENST00000506516 HCAR3P49019 387 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 ATP1A2P50993 1020 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 IRAK1P51617 712 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 YBEYP58557 167 aaPredicted RBP7.44□□□□□ -1.22
GYPB-206ENST00000506516 TPI1P60174 286 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 GNA12Q03113 381 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 ZNF252P-AS1Q0IIN9 211 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 CAMK2GQ13555 558 aaPredicted RBP7.44□□□□□ -1.22
GYPB-206ENST00000506516 POLD3Q15054 466 aaPredicted RBP7.44□□□□□ -1.22
GYPB-206ENST00000506516 ELF2Q15723 593 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 HNRNPA1L2Q32P51 320 aaKnown RBP7.44□□□□□ -1.22
GYPB-206ENST00000506516 CRTC2Q53ET0 693 aaPredicted RBP7.44□□□□□ -1.22
GYPB-206ENST00000506516 FAM72AQ5TYM5 149 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 MANEALQ5VSG8 457 aa7.44□□□□□ -1.22
GYPB-206ENST00000506516 IL31Q6EBC2 164 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms