RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 ZNF177Q13360 481 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 CLEC16AQ2KHT3 1053 aa17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 KIAA0895LQ68EN5 471 aa17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 CAVIN1Q6NZI2 390 aaKnown RBP17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 LINGO4Q6UY18 593 aa17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 MON1BQ7L1V2 547 aa17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 CCDC117Q8IWD4 279 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 SH2D3CQ8N5H7 860 aa17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 CCDC185Q8N715 623 aa17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 NEK11Q8NG66 645 aa17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 BAP1Q92560 729 aa17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 PCMTD1Q96MG8 357 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 TAS2R14Q9NYV8 317 aa17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 SUSD2Q9UGT4 822 aa17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 ADAMTS1Q9UHI8 967 aa17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 VPS51Q9UID3 782 aa17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 GOLGA6L22H0YM25 854 aa17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 OPHN1O60890 802 aa17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 SRGAP2O75044 1071 aa17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 CLDN11O75508 207 aa17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 RNASEH2AO75792 299 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 RHOCP08134 193 aa17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 RRM1P23921 792 aa17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 RDXP35241 583 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 RFC1P35251 1148 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 ATXN3P54252 364 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 HDAC4P56524 1084 aa17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 SNX16P57768 344 aa17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 DLG2Q15700 870 aa17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 KIF19Q2TAC6 998 aa17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 TTC31Q49AM3 519 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 MANEALQ5VSG8 457 aa17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 USP30Q70CQ3 517 aa17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 HDDC3Q8N4P3 179 aa17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 FAM131CQ96AQ9 280 aa17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 SLC6A18Q96N87 628 aa17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 NAP1L5Q96NT1 182 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 CAAP1Q9H8G2 361 aa17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 SGK2Q9HBY8 427 aa17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 VPS28Q9UK41 221 aa17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 SNX11Q9Y5W9 270 aa17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 CABIN1Q9Y6J0 2220 aa17.17■□□□□ 0.34
PDLIM7-215ENST00000506161 UPK3BL1B0FP48 263 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 UPK3BL2E5RIL1 263 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 TAF4O00268 1085 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 RTN2O75298 545 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 ZNF821O75541 412 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 ZMPSTE24O75844 475 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 CD160O95971 181 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 IL1BP01584 269 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 SYPP08247 313 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 GNSP15586 552 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 CDK11BP21127 795 aaKnown RBP17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 VASPP50552 380 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 ADPRHP54922 357 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 IQCB1Q15051 598 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 HLA-BQ31612 363 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 WDR59Q6PJI9 974 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 ARCQ7LC44 396 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 IRF2BP2Q7Z5L9 587 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 RABEPKQ7Z6M1 372 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 CHST14Q8NCH0 376 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 GANCQ8TET4 914 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 CENPIQ92674 756 aaPredicted RBP17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 VOPP1Q96AW1 172 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 C1orf74Q96LT6 269 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 AGPAT1Q99943 283 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 MUC3BQ9H195 1237 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 PCED1AQ9H1Q7 454 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 GAREM1Q9H706 876 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 RTN4Q9NQC3 1192 aaKnown RBP17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 BTBD3Q9Y2F9 522 aa17.16■□□□□ 0.34
PDLIM7-215ENST00000506161 BNIP3LO60238 219 aa17.15■□□□□ 0.34
PDLIM7-215ENST00000506161 F9P00740 461 aa17.15■□□□□ 0.34
PDLIM7-215ENST00000506161 CD27P26842 260 aa17.15■□□□□ 0.34
PDLIM7-215ENST00000506161 GSCP56915 257 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-215ENST00000506161 RPL7AP62424 266 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-215ENST00000506161 ARF5P84085 180 aa17.15■□□□□ 0.34
PDLIM7-215ENST00000506161 OGDHQ02218 1023 aa17.15■□□□□ 0.34
PDLIM7-215ENST00000506161 SULT2A1Q06520 285 aa17.15■□□□□ 0.34
PDLIM7-215ENST00000506161 ELAVL3Q14576 367 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-215ENST00000506161 ACCSLQ4AC99 568 aa17.15■□□□□ 0.34
PDLIM7-215ENST00000506161 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-215ENST00000506161 PHF13Q86YI8 300 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-215ENST00000506161 PYROXD2Q8N2H3 581 aa17.15■□□□□ 0.34
PDLIM7-215ENST00000506161 ARRDC3Q96B67 414 aa17.15■□□□□ 0.34
PDLIM7-215ENST00000506161 HAPLN3Q96S86 360 aa17.15■□□□□ 0.34
PDLIM7-215ENST00000506161 SLC25A13Q9UJS0 675 aa17.15■□□□□ 0.34
PDLIM7-215ENST00000506161 PPM1HQ9ULR3 514 aa17.15■□□□□ 0.34
PDLIM7-215ENST00000506161 HS3ST2Q9Y278 367 aa17.15■□□□□ 0.34
PDLIM7-215ENST00000506161 NEUROG3Q9Y4Z2 214 aa17.15■□□□□ 0.34
PDLIM7-215ENST00000506161 LRRK1Q38SD2 2015 aa17.14■□□□□ 0.34
PDLIM7-215ENST00000506161 CCP110O43303 1012 aa17.14■□□□□ 0.33
PDLIM7-215ENST00000506161 HYAL3O43820 417 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-215ENST00000506161 CBFA2T3O75081 653 aa17.14■□□□□ 0.33
PDLIM7-215ENST00000506161 TPM2P07951 284 aa17.14■□□□□ 0.33
PDLIM7-215ENST00000506161 C5AR1P21730 350 aa17.14■□□□□ 0.33
PDLIM7-215ENST00000506161 ADRA1BP35368 520 aa17.14■□□□□ 0.33
PDLIM7-215ENST00000506161 ACVRL1P37023 503 aa17.14■□□□□ 0.33
PDLIM7-215ENST00000506161 PTPN9P43378 593 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms