RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 SPATA31C2B4DYI2 1134 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 RTCAO00442 366 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CA12O43570 354 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 DLX3O60479 287 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 LCA5LO95447 670 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 TBX18O95935 607 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 KRT1P04264 644 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 NPR1P16066 1061 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 DNASE1P24855 282 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 GSTM2P28161 218 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 MAPK4P31152 587 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CDH5P33151 784 aaPredicted RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 KCNJ5P48544 419 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CACNB2Q08289 660 aaPredicted RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 HYAL2Q12891 473 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 SF3B4Q15427 424 aaKnown RBP eCLIP2.33□□□□□ -2.041e-17■■■■■ 61.1
NEDD4-205ENST00000506154 CLEC16AQ2KHT3 1053 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ZNF792Q3KQV3 632 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 AGBL2Q5U5Z8 902 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 RGS9BPQ6ZS82 235 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ZFAND4Q86XD8 727 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 HPS6Q86YV9 775 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 SPATA5Q8NB90 893 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 PJA1Q8NG27 643 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 OR52K2Q8NGK3 314 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 NEDD1Q8NHV4 660 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CPT1CQ8TCG5 803 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ATP6V1G3Q96LB4 118 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 NECAB3Q96P71 396 aaPredicted RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 PIP5K1AQ99755 562 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 TSEN34Q9BSV6 310 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CALN1Q9BXU9 219 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 KRTAP3-3Q9BYR6 98 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 KRTAP3-2Q9BYR7 98 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 KLC2Q9H0B6 622 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 NT5C3AQ9H0P0 336 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 TDRD3Q9H7E2 651 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 RSAD1Q9HA92 442 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 NGRNQ9NPE2 291 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CLDND1Q9NY35 253 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 STX18Q9P2W9 335 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 MTUS1Q9ULD2 1270 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ERGIC3Q9Y282 383 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ATP11BQ9Y2G3 1177 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 HBS1LQ9Y450 684 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 MYH6P13533 1939 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ANO9A1A5B4 782 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 NOTOA8MTQ0 251 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ZW10O43264 779 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 PPP1R11O60927 126 aaPredicted RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 LDOC1O95751 146 aaPredicted RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 AFPP02771 609 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 GSTP1P09211 210 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 HSPD1P10809 573 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 GCH1P30793 250 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 SLC19A1P41440 591 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 SLC26A2P50443 739 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CLCN5P51795 746 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 SEC24CP53992 1094 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 XIAPP98170 497 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 BTKQ06187 659 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 SNAPC2Q13487 334 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 PUM3Q15397 648 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 STK11Q15831 433 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 GRIK4Q16099 956 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 KIAA1755Q5JYT7 1200 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 NANOGP8Q6NSW7 305 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 NPNTQ6UXI9 565 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 RAD9BQ6WBX8 426 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 GADL1Q6ZQY3 521 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CLVS1Q8IUQ0 354 aaPredicted RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CLYBLQ8N0X4 340 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 AFAP1L2Q8N4X5 818 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 BEND7Q8N7W2 519 aaPredicted RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 C12orf50Q8NA57 414 aaPredicted RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 TMEM40Q8WWA1 233 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CASP10Q92851 521 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CDCA5Q96FF9 252 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CNDP2Q96KP4 475 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 SNX18Q96RF0 628 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ATP13A1Q9HD20 1204 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 CNGB3Q9NQW8 809 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 RCOR1Q9UKL0 485 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 PLA2G2DQ9UNK4 145 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 GAB2Q9UQC2 676 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 TRIM17Q9Y577 477 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 SF3B1O75533 1304 aaKnown RBP eCLIP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 H0Y858 1186 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 GOLGA8RI6L899 631 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 SYN3O14994 580 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 DENRO43583 198 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 TRIM16O95361 564 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 PLEKHA8P1O95397 391 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 TFRCP02786 760 aaKnown RBP2.33□□□□□ -2.04
NEDD4-205ENST00000506154 MPOP05164 745 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 HBQ1P09105 142 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 ACADMP11310 421 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 KRT4P19013 534 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 EDNRBP24530 442 aa2.33□□□□□ -2.04
NEDD4-205ENST00000506154 VAV2P52735 878 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms