RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 KLHDC10Q6PID8 442 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.47□□□□□ -1.85
TCOF1-208ENST00000506063 KYAT3Q6YP21 454 aaKnown RBP3.47□□□□□ -1.85
TCOF1-208ENST00000506063 PAQR9Q6ZVX9 377 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 NEK8Q86SG6 692 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 FJX1Q86VR8 437 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 PARGQ86W56 976 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 KRTAP1-3Q8IUG1 177 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 CCDC117Q8IWD4 279 aaPredicted RBP3.47□□□□□ -1.85
TCOF1-208ENST00000506063 BLIDQ8IZY5 108 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 NUP93Q8N1F7 819 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 STK40Q8N2I9 435 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 TOP6BLQ8N6T0 577 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 ARL10Q8N8L6 244 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 C1orf127Q8N9H9 656 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 CHDHQ8NE62 594 aaPredicted RBP3.47□□□□□ -1.85
TCOF1-208ENST00000506063 ZMIZ2Q8NF64 920 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 GPR156Q8NFN8 814 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 DNAJB8Q8NHS0 232 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 MYCBPAPQ8TBZ2 947 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 WFIKKN2Q8TEU8 576 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 NINJ1Q92982 152 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 ART4Q93070 314 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 TTC17Q96AE7 1141 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 TBATAQ96M53 351 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 CCDC43Q96MW1 224 aaKnown RBP3.47□□□□□ -1.85
TCOF1-208ENST00000506063 IL12RB2Q99665 862 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 NUDT22Q9BRQ3 303 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 LARP6Q9BRS8 491 aaKnown RBP3.47□□□□□ -1.85
TCOF1-208ENST00000506063 SLC25A23Q9BV35 468 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 B3GNT5Q9BYG0 378 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 ENKD1Q9H0I2 346 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 NMUR1Q9HB89 426 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 TUFT1Q9NNX1 390 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 SLAMF7Q9NQ25 335 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 MRPL40Q9NQ50 206 aaKnown RBP3.47□□□□□ -1.85
TCOF1-208ENST00000506063 KMT5AQ9NQR1 393 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 ABCB8Q9NUT2 735 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 OCIAD1Q9NX40 245 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 SUN2Q9UH99 717 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 SIX4Q9UIU6 781 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 NUDT5Q9UKK9 219 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 AGO1Q9UL18 857 aaKnown RBP3.47□□□□□ -1.85
TCOF1-208ENST00000506063 CDH9Q9ULB4 789 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 PLA2G4CQ9UP65 541 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 OSGIN2Q9Y236 505 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 POLHQ9Y253 713 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 TMEM184BQ9Y519 407 aaPredicted RBP3.47□□□□□ -1.85
TCOF1-208ENST00000506063 RBM8AQ9Y5S9 174 aaKnown RBP3.47□□□□□ -1.85
TCOF1-208ENST00000506063 NUP210LQ5VU65 1888 aa3.47□□□□□ -1.85
TCOF1-208ENST00000506063 ARID1AO14497 2285 aa3.46□□□□□ -1.85
TCOF1-208ENST00000506063 WNK1Q9H4A3 2382 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 SPTBP11277 2137 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 KLF18A0A0U1RQI7 1052 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 A0A1W2PQU0 124 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 ARHGEF35A5YM69 484 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 A6NNZ2 444 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 TTC34A8MYJ7 566 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 RNF103O00237 685 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 B4GAT1O43505 415 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 CCNT1O60563 726 aaKnown RBP3.46□□□□□ -1.86
TCOF1-208ENST00000506063 HIP1RO75146 1068 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 BEST1O76090 585 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 LY6G6DO95868 133 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 ADH1BP00325 375 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 PIGRP01833 764 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 INHBBP09529 407 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 TSHRP16473 764 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 PDCP20941 246 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 HNRNPA2B1P22626 353 aaKnown RBP3.46□□□□□ -1.86
TCOF1-208ENST00000506063 POLR2BP30876 1174 aaKnown RBP3.46□□□□□ -1.86
TCOF1-208ENST00000506063 CHKAP35790 457 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 CTSOP43234 321 aaPredicted RBP3.46□□□□□ -1.86
TCOF1-208ENST00000506063 NOP2P46087 812 aaKnown RBP3.46□□□□□ -1.86
TCOF1-208ENST00000506063 LHX1P48742 406 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 ARID5AQ03989 594 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 CNTN1Q12860 1018 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 ZNF235Q14590 738 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 PRRT3Q5FWE3 981 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 MDH1BQ5I0G3 518 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 CERCAMQ5T4B2 595 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 PHF19Q5T6S3 580 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 PIP5KL1Q5T9C9 394 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 ANKRD45Q5TZF3 282 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 PLEKHA7Q6IQ23 1121 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 CRELD2Q6UXH1 353 aaPredicted RBP3.46□□□□□ -1.86
TCOF1-208ENST00000506063 CLEC9AQ6UXN8 241 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 NYAP1Q6ZVC0 841 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 PTAR1Q7Z6K3 402 aaPredicted RBP3.46□□□□□ -1.86
TCOF1-208ENST00000506063 KCNMB4Q86W47 210 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 DCP2Q8IU60 420 aaKnown RBP3.46□□□□□ -1.86
TCOF1-208ENST00000506063 CCDC83Q8IWF9 413 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 CD302Q8IX05 232 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 IQCKQ8N0W5 287 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 ZNF808Q8N4W9 903 aaPredicted RBP3.46□□□□□ -1.86
TCOF1-208ENST00000506063 Q8N9G6 341 aaPredicted RBP3.46□□□□□ -1.86
TCOF1-208ENST00000506063 KDM1BQ8NB78 822 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 WFDC11Q8NEX6 87 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 PCDH19Q8TAB3 1148 aa3.46□□□□□ -1.86
TCOF1-208ENST00000506063 GTF3C6Q969F1 213 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms