RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 KATNAL1Q9BW62 490 aa4.35□□□□□ -1.71
LINC00616-202ENST00000505874 ELAC1Q9H777 363 aaKnown RBP4.35□□□□□ -1.71
LINC00616-202ENST00000505874 Q9N2J8 555 aa4.35□□□□□ -1.71
LINC00616-202ENST00000505874 CD93Q9NPY3 652 aa4.35□□□□□ -1.71
LINC00616-202ENST00000505874 PLEKHB1Q9UF11 243 aaPredicted RBP4.35□□□□□ -1.71
LINC00616-202ENST00000505874 SAC3D1A6NKF1 404 aa4.34□□□□□ -1.71
LINC00616-202ENST00000505874 ACTL6BO94805 426 aa4.34□□□□□ -1.71
LINC00616-202ENST00000505874 ITGA2BP08514 1039 aa4.34□□□□□ -1.71
LINC00616-202ENST00000505874 IFIT2P09913 472 aaKnown RBP4.34□□□□□ -1.71
LINC00616-202ENST00000505874 TYK2P29597 1187 aa4.34□□□□□ -1.71
LINC00616-202ENST00000505874 OAZ1P54368 228 aa4.34□□□□□ -1.71
LINC00616-202ENST00000505874 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.71
LINC00616-202ENST00000505874 RPS6KA2Q15349 733 aa4.34□□□□□ -1.71
LINC00616-202ENST00000505874 DUSP6Q16828 381 aa4.34□□□□□ -1.71
LINC00616-202ENST00000505874 PLK5Q496M5 336 aa4.34□□□□□ -1.71
LINC00616-202ENST00000505874 C5orf22Q49AR2 442 aa4.34□□□□□ -1.71
LINC00616-202ENST00000505874 MTFR2Q6P444 385 aa4.34□□□□□ -1.71
LINC00616-202ENST00000505874 SYNE3Q6ZMZ3 975 aa4.34□□□□□ -1.71
LINC00616-202ENST00000505874 ZNF367Q7RTV3 350 aa4.34□□□□□ -1.71
LINC00616-202ENST00000505874 RBM23Q86U06 439 aaKnown RBP4.34□□□□□ -1.71
LINC00616-202ENST00000505874 NR2C2APQ86WQ0 139 aa4.34□□□□□ -1.71
LINC00616-202ENST00000505874 LMO3Q8TAP4 145 aa4.34□□□□□ -1.71
LINC00616-202ENST00000505874 NPAS1Q99742 590 aa4.34□□□□□ -1.71
LINC00616-202ENST00000505874 TRIM31Q9BZY9 425 aa4.34□□□□□ -1.71
LINC00616-202ENST00000505874 TMEM248Q9NWD8 314 aa4.34□□□□□ -1.71
LINC00616-202ENST00000505874 ZDHHC7Q9NXF8 308 aa4.34□□□□□ -1.71
LINC00616-202ENST00000505874 RCE1Q9Y256 329 aa4.34□□□□□ -1.71
LINC00616-202ENST00000505874 A0A087WV62 115 aa4.33□□□□□ -1.72
LINC00616-202ENST00000505874 NPIPB13A6NJU9 1138 aa4.33□□□□□ -1.72
LINC00616-202ENST00000505874 NPIPB5A8MRT5 1133 aa4.33□□□□□ -1.72
LINC00616-202ENST00000505874 NPIPB4C9JG80 1138 aa4.33□□□□□ -1.72
LINC00616-202ENST00000505874 MS4A18H0YCH9 400 aa4.33□□□□□ -1.72
LINC00616-202ENST00000505874 LYL1P12980 280 aa4.33□□□□□ -1.72
LINC00616-202ENST00000505874 AVPR1AP37288 418 aa4.33□□□□□ -1.72
LINC00616-202ENST00000505874 PPP3CCP48454 512 aa4.33□□□□□ -1.72
LINC00616-202ENST00000505874 PDLIM4P50479 330 aa4.33□□□□□ -1.72
LINC00616-202ENST00000505874 RRP1P56182 461 aaKnown RBP4.33□□□□□ -1.72
LINC00616-202ENST00000505874 ALKBH1Q13686 389 aaKnown RBP4.33□□□□□ -1.72
LINC00616-202ENST00000505874 IZUMO4Q1ZYL8 232 aa4.33□□□□□ -1.72
LINC00616-202ENST00000505874 GALNTL6Q49A17 601 aa4.33□□□□□ -1.72
LINC00616-202ENST00000505874 FSCBQ5H9T9 825 aa4.33□□□□□ -1.72
LINC00616-202ENST00000505874 PGBD2Q6P3X8 592 aa4.33□□□□□ -1.72
LINC00616-202ENST00000505874 Q6ZTC4 211 aa4.33□□□□□ -1.72
LINC00616-202ENST00000505874 RAB11FIP2Q7L804 512 aa4.33□□□□□ -1.72
LINC00616-202ENST00000505874 ATG16L2Q8NAA4 619 aa4.33□□□□□ -1.72
LINC00616-202ENST00000505874 SCAMP5Q8TAC9 235 aa4.33□□□□□ -1.72
LINC00616-202ENST00000505874 TM6SF1Q9BZW5 370 aa4.33□□□□□ -1.72
LINC00616-202ENST00000505874 VPS33BQ9H267 617 aa4.33□□□□□ -1.72
LINC00616-202ENST00000505874 CDH22Q9UJ99 828 aa4.33□□□□□ -1.72
LINC00616-202ENST00000505874 TMCC1O94876 653 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 PRSS2P07478 247 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 FCGR2AP12318 317 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 UNGP13051 313 aaPredicted RBP4.32□□□□□ -1.72
LINC00616-202ENST00000505874 GSTM2P28161 218 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 PDIA3P30101 505 aaKnown RBP4.32□□□□□ -1.72
LINC00616-202ENST00000505874 PNLIPRP1P54315 467 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 AP2B1P63010 937 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 GALNT1Q10472 559 aaPredicted RBP4.32□□□□□ -1.72
LINC00616-202ENST00000505874 PKP1Q13835 747 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 ZACNQ401N2 412 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 MAP9Q49MG5 647 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 GXYLT1Q4G148 440 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 LRRC24Q50LG9 513 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 VWA5B1Q5TIE3 1220 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 CCSAPQ6IQ19 270 aaPredicted RBP4.32□□□□□ -1.72
LINC00616-202ENST00000505874 HEPHL1Q6MZM0 1159 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 KLHL17Q6TDP4 642 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 FAM83HQ6ZRV2 1179 aaPredicted RBP4.32□□□□□ -1.72
LINC00616-202ENST00000505874 SLC44A2Q8IWA5 706 aaPredicted RBP4.32□□□□□ -1.72
LINC00616-202ENST00000505874 CEP76Q8TAP6 659 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 SLC2A12Q8TD20 617 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 C2CD4CQ8TF44 421 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 CPT1BQ92523 772 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 ARRDC3Q96B67 414 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 C3orf49Q96BT1 292 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 EID2BQ96D98 161 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 PIGSQ96S52 555 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 CDT1Q9H211 546 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 KLHL31Q9H511 634 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 C6orf106Q9H6K1 298 aaPredicted RBP4.32□□□□□ -1.72
LINC00616-202ENST00000505874 ACAD9Q9H845 621 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 PRDM8Q9NQV8 689 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 CHST12Q9NRB3 414 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 HERC5Q9UII4 1024 aaKnown RBP4.32□□□□□ -1.72
LINC00616-202ENST00000505874 C19orf53Q9UNZ5 99 aaPredicted RBP4.32□□□□□ -1.72
LINC00616-202ENST00000505874 LRCH1Q9Y2L9 728 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 PCDHGB1Q9Y5G3 927 aa4.32□□□□□ -1.72
LINC00616-202ENST00000505874 VWA5AO00534 786 aa4.31□□□□□ -1.72
LINC00616-202ENST00000505874 SYN3O14994 580 aa4.31□□□□□ -1.72
LINC00616-202ENST00000505874 SKAP2O75563 359 aaPredicted RBP4.31□□□□□ -1.72
LINC00616-202ENST00000505874 HLA-DQA2P01906 255 aa4.31□□□□□ -1.72
LINC00616-202ENST00000505874 CYP21A2P08686 494 aa4.31□□□□□ -1.72
LINC00616-202ENST00000505874 SERPINB3P29508 390 aa4.31□□□□□ -1.72
LINC00616-202ENST00000505874 SERPINA4P29622 427 aa4.31□□□□□ -1.72
LINC00616-202ENST00000505874 CDK7P50613 346 aa4.31□□□□□ -1.72
LINC00616-202ENST00000505874 TNFAIP2Q03169 654 aa4.31□□□□□ -1.72
LINC00616-202ENST00000505874 DSC1Q08554 894 aa4.31□□□□□ -1.72
LINC00616-202ENST00000505874 HNF4GQ14541 408 aa4.31□□□□□ -1.72
LINC00616-202ENST00000505874 PUM3Q15397 648 aaKnown RBP4.31□□□□□ -1.72
LINC00616-202ENST00000505874 SHBQ15464 509 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms