RNA–Protein interactions for RNA: ENST00000505065.1

CDC42SE2-208, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-208ENST00000505065 ETF1P62495 437 aaKnown RBP8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 SMTNL2Q2TAL5 461 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 ZNF852Q6ZMS4 543 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 PGBD5Q8N414 524 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 IL17RCQ8NAC3 791 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 SHDQ96IW2 340 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 MPP6Q9NZW5 540 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 ERVW-1Q9UQF0 538 aa8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 MTF2Q9Y483 593 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE2-208ENST00000505065 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 A0A0D9SEW6 157 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 RASA4BC9J798 803 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 NEDD8-MDP1E9PL57 170 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 TRAFD1O14545 582 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 RASA4O43374 803 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 NRDCO43847 1150 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 LILRB5O75023 590 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 KAT7O95251 611 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 HMBSP08397 361 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 ALADP13716 330 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 VAV1P15498 845 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 PECAM1P16284 738 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 C9orf64Q5T6V5 341 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 CIR1Q86X95 450 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 SLC13A5Q86YT5 568 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 HMCESQ96FZ2 354 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 KCNH6Q9H252 994 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 RNF14Q9UBS8 474 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 VPS51Q9UID3 782 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 MACROD2A1Z1Q3 448 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 TMEM221A6NGB7 291 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 M0R296 226 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 TULP1O00294 542 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 ITGAVP06756 1048 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 TPI1P60174 286 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 SKIV2LQ15477 1246 aaKnown RBP8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 LRRC31Q6UY01 552 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 PEX26Q7Z412 305 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 TP53INP2Q8IXH6 220 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 SEC14L1Q92503 715 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 FAM3CQ92520 227 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 ALS2CR12Q96Q35 445 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 OSBPL9Q96SU4 736 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 RSPH9Q9H1X1 276 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 DHX35Q9H5Z1 703 aaKnown RBP8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 USP36Q9P275 1121 aaKnown RBP8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 PCSK1NQ9UHG2 260 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 MMP17Q9ULZ9 603 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 GUCA1BQ9UMX6 200 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 ARIH1Q9Y4X5 557 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 USP34Q70CQ2 3546 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 MATN3O15232 486 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 FTCDO95954 541 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 SRCP12931 536 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 AMPD1P23109 780 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 SOX9P48436 509 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 CDH6P55285 790 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 WASHC5Q12768 1159 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 PEAR1Q5VY43 1037 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 KCTD11Q693B1 232 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 MAP7D3Q8IWC1 876 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 CFAP52Q8N1V2 620 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 UBL4BQ8N7F7 174 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 CSGALNACT1Q8TDX6 532 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 PTPRN2Q92932 1015 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 TRIB3Q96RU7 358 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 OSBPL8Q9BZF1 889 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 ELOVL2Q9NXB9 296 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 MYO9BQ13459 2157 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 TCRBV7S2A1N4TA0A589 114 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 SPDYE4A6NLX3 237 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 TP73O15350 636 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 SPINT1O43278 529 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 ZRANB2O95218 330 aaKnown RBP eCLIP8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 CYBBP04839 570 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 LRRC32Q14392 662 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 AGERQ15109 404 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 PSKH2Q96QS6 385 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 LZTFL1Q9NQ48 299 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 HYOU1Q9Y4L1 999 aa8.47□□□□□ -1.05
CDC42SE2-208ENST00000505065 PRR33A8MZF0 331 aa8.46□□□□□ -1.05
CDC42SE2-208ENST00000505065 TRIM24O15164 1050 aa8.46□□□□□ -1.05
CDC42SE2-208ENST00000505065 HTRA2O43464 458 aaPredicted RBP8.46□□□□□ -1.05
CDC42SE2-208ENST00000505065 LIASO43766 372 aa8.46□□□□□ -1.05
CDC42SE2-208ENST00000505065 DLDP09622 509 aaKnown RBP8.46□□□□□ -1.05
CDC42SE2-208ENST00000505065 ACVRL1P37023 503 aa8.46□□□□□ -1.05
CDC42SE2-208ENST00000505065 PAPOLAP51003 745 aaKnown RBP8.46□□□□□ -1.05
CDC42SE2-208ENST00000505065 CCNG2Q16589 344 aa8.46□□□□□ -1.05
CDC42SE2-208ENST00000505065 AADACL2Q6P093 401 aa8.46□□□□□ -1.05
CDC42SE2-208ENST00000505065 TPRG1Q6ZUI0 275 aa8.46□□□□□ -1.05
CDC42SE2-208ENST00000505065 YAF2Q8IY57 180 aa8.46□□□□□ -1.05
CDC42SE2-208ENST00000505065 EXOC4Q96A65 974 aa8.46□□□□□ -1.05
CDC42SE2-208ENST00000505065 FAM129BQ96TA1 746 aa8.46□□□□□ -1.05
CDC42SE2-208ENST00000505065 SLITRK6Q9H5Y7 841 aa8.46□□□□□ -1.05
CDC42SE2-208ENST00000505065 L2HGDHQ9H9P8 463 aa8.46□□□□□ -1.05
CDC42SE2-208ENST00000505065 C5orf60A6NFR6 353 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 GCATO75600 419 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 KRT1P04264 644 aa8.46□□□□□ -1.06
CDC42SE2-208ENST00000505065 SERPINB6P35237 376 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms