RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 FAM174AQ8TBP5 190 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 ARHGEF26Q96DR7 871 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 MRGPRX1Q96LB2 322 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 BTBD1Q9H0C5 482 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 DUSP15Q9H1R2 295 aaPredicted RBP10.09□□□□□ -0.79
NR1I3-220ENST00000505005 RSPH9Q9H1X1 276 aaPredicted RBP10.09□□□□□ -0.79
NR1I3-220ENST00000505005 DHX35Q9H5Z1 703 aaKnown RBP10.09□□□□□ -0.79
NR1I3-220ENST00000505005 VPS45Q9NRW7 570 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 DDX56Q9NY93 547 aaKnown RBP10.09□□□□□ -0.79
NR1I3-220ENST00000505005 XPO7Q9UIA9 1087 aaKnown RBP10.09□□□□□ -0.79
NR1I3-220ENST00000505005 EPN1Q9Y6I3 576 aaPredicted RBP10.09□□□□□ -0.79
NR1I3-220ENST00000505005 R4GN57 208 aa10.09□□□□□ -0.79
NR1I3-220ENST00000505005 LRRC72A6NJI9 287 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 TRIM24O15164 1050 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 HRO43593 1189 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 KDELR3O43731 214 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 MAGEC1O60732 1142 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 LRCH4O75427 683 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 GABRG2P18507 467 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 CES1P23141 567 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 HSPA9P38646 679 aaKnown RBP10.08□□□□□ -0.8
NR1I3-220ENST00000505005 SSR1P43307 286 aaKnown RBP10.08□□□□□ -0.8
NR1I3-220ENST00000505005 SGSHP51688 502 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 LMNB2Q03252 620 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 KRT81Q14533 505 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 PTPRNQ16849 979 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 PLK5Q496M5 336 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 FSCBQ5H9T9 825 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 RALGPS1Q5JS13 557 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 ZFYVE27Q5T4F4 411 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 TMEM215Q68D42 235 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 NAIF1Q69YI7 327 aaPredicted RBP10.08□□□□□ -0.8
NR1I3-220ENST00000505005 TRNP1Q6NT89 227 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 NEK5Q6P3R8 708 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 KIAA1324Q6UXG2 1013 aaKnown RBP10.08□□□□□ -0.8
NR1I3-220ENST00000505005 PHLDB2Q86SQ0 1253 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 ZNF354CQ86Y25 554 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 SUMF1Q8NBK3 374 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 HCAR2Q8TDS4 363 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 ZNF599Q96NL3 588 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 BAG1Q99933 345 aaPredicted RBP10.08□□□□□ -0.8
NR1I3-220ENST00000505005 OMDQ99983 421 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 FERMT1Q9BQL6 677 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 SPON2Q9BUD6 331 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 OSBPL1AQ9BXW6 950 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 MAK16Q9BXY0 300 aaKnown RBP10.08□□□□□ -0.8
NR1I3-220ENST00000505005 ACE2Q9BYF1 805 aaPredicted RBP10.08□□□□□ -0.8
NR1I3-220ENST00000505005 PRSS16Q9NQE7 514 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 CALCOCO1Q9P1Z2 691 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 USP36Q9P275 1121 aaKnown RBP10.08□□□□□ -0.8
NR1I3-220ENST00000505005 CLEC4EQ9ULY5 219 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 OR51B4Q9Y5P0 310 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 RAD54BQ9Y620 910 aa10.08□□□□□ -0.8
NR1I3-220ENST00000505005 PLXND1Q9Y4D7 1925 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 SPAG17Q6Q759 2223 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 COL4A3Q01955 1670 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 BTNL10A8MVZ5 291 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 CBX4O00257 560 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 EPN2O95208 641 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 NDUFA10O95299 355 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 POP4O95707 220 aaKnown RBP10.07□□□□□ -0.8
NR1I3-220ENST00000505005 NDUFV2P19404 249 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 TFE3P19532 575 aaPredicted RBP10.07□□□□□ -0.8
NR1I3-220ENST00000505005 MX2P20592 715 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 FECHP22830 423 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 WASP42768 502 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 NOP2P46087 812 aaKnown RBP10.07□□□□□ -0.8
NR1I3-220ENST00000505005 RPL6Q02878 288 aaKnown RBP10.07□□□□□ -0.8
NR1I3-220ENST00000505005 ZNF33AQ06730 810 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 SEMA3BQ13214 749 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 DLG2Q15700 870 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 ALFQ53S48 1182 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 SLC45A4Q5BKX6 768 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 PPP6R3Q5H9R7 873 aaPredicted RBP10.07□□□□□ -0.8
NR1I3-220ENST00000505005 PMS2CLQ68D20 193 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 TIGD7Q6NT04 549 aaPredicted RBP10.07□□□□□ -0.8
NR1I3-220ENST00000505005 PKN3Q6P5Z2 889 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 TMCO3Q6UWJ1 677 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 RFX8Q6ZV50 586 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 TFAP2DQ7Z6R9 452 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 C14orf80Q86SX3 495 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 NLRP14Q86W24 1093 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 SYT12Q8IV01 421 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 RHOT1Q8IXI2 618 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 APCDD1Q8J025 514 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 SYCE1Q8N0S2 351 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 CCDC185Q8N715 623 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 C12orf50Q8NA57 414 aaPredicted RBP10.07□□□□□ -0.8
NR1I3-220ENST00000505005 KCTD6Q8NC69 237 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 SLC35G2Q8TBE7 412 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 GANCQ8TET4 914 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 CYB5D2Q8WUJ1 264 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 ARHGEF2Q92974 986 aaKnown RBP10.07□□□□□ -0.8
NR1I3-220ENST00000505005 RAB7BQ96AH8 199 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 ALG14Q96F25 216 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 ZNF830Q96NB3 372 aaPredicted RBP10.07□□□□□ -0.8
NR1I3-220ENST00000505005 ACOX2Q99424 681 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 CHP1Q99653 195 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 ZNF670Q9BS34 389 aa10.07□□□□□ -0.8
NR1I3-220ENST00000505005 SNRNP25Q9BV90 132 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms