RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 PPP2CBP62714 309 aa13.52□□□□□ -0.25
DDX41-204ENST00000504807 PPP2CAP67775 309 aa13.52□□□□□ -0.25
DDX41-204ENST00000504807 NOMO3P69849 1222 aa13.52□□□□□ -0.25
DDX41-204ENST00000504807 KRT31Q15323 416 aa13.52□□□□□ -0.25
DDX41-204ENST00000504807 SMAD1Q15797 465 aaKnown RBP13.52□□□□□ -0.25
DDX41-204ENST00000504807 NCEH1Q6PIU2 408 aa13.52□□□□□ -0.25
DDX41-204ENST00000504807 PHLDB2Q86SQ0 1253 aa13.52□□□□□ -0.25
DDX41-204ENST00000504807 KDM1BQ8NB78 822 aa13.52□□□□□ -0.25
DDX41-204ENST00000504807 BAHD1Q8TBE0 780 aaPredicted RBP13.52□□□□□ -0.25
DDX41-204ENST00000504807 EPS8L1Q8TE68 723 aa13.52□□□□□ -0.25
DDX41-204ENST00000504807 CPA5Q8WXQ8 436 aa13.52□□□□□ -0.25
DDX41-204ENST00000504807 NXPE2Q96DL1 559 aa13.52□□□□□ -0.25
DDX41-204ENST00000504807 FAM81BQ96LP2 452 aa13.52□□□□□ -0.25
DDX41-204ENST00000504807 SLC6A18Q96N87 628 aa13.52□□□□□ -0.25
DDX41-204ENST00000504807 RPRD1AQ96P16 312 aaPredicted RBP13.52□□□□□ -0.25
DDX41-204ENST00000504807 CDC6Q99741 560 aa13.52□□□□□ -0.25
DDX41-204ENST00000504807 VPS16Q9H269 839 aa13.52□□□□□ -0.25
DDX41-204ENST00000504807 FBXL12Q9NXK8 326 aa13.52□□□□□ -0.25
DDX41-204ENST00000504807 ARHGEF38Q9NXL2 777 aa13.52□□□□□ -0.25
DDX41-204ENST00000504807 ZNF212Q9UDV6 495 aa13.52□□□□□ -0.25
DDX41-204ENST00000504807 SUN2Q9UH99 717 aa13.52□□□□□ -0.25
DDX41-204ENST00000504807 TMEM59LQ9UK28 342 aa13.52□□□□□ -0.25
DDX41-204ENST00000504807 COL6A6A6NMZ7 2263 aa13.52□□□□□ -0.25
DDX41-204ENST00000504807 A0A1B0GVM2 712 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 TCAF2A6NFQ2 919 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 FAM47DPA6NHR8 397 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 K7ERQ8 282 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 ERVH48-1M5A8F1 160 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 SNAP91O60641 907 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 ABCB4P21439 1286 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 GLDCP23378 1020 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 SLC8A1P32418 973 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 NOS2P35228 1153 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 SULT1E1P49888 294 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 ST8SIA6P61647 398 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 ZBTB16Q05516 673 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 POM121L1PQ3SYA9 428 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 PRAMEF14Q5SWL7 426 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 NAA35Q5VZE5 725 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 KIAA0895LQ68EN5 471 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 DHRS13Q6UX07 377 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 DBX2Q6ZNG2 339 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 APTXQ7Z2E3 356 aaKnown RBP13.51□□□□□ -0.25
DDX41-204ENST00000504807 FAM114A1Q8IWE2 563 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 EMC1Q8N766 993 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 RNF34Q969K3 372 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 CFAP57Q96MR6 1250 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 PCDHB18PQ96TA0 734 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 FEM1AQ9BSK4 669 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 TRIM62Q9BVG3 475 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 ZDHHC5Q9C0B5 715 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 TKTL2Q9H0I9 626 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 SIK2Q9H0K1 926 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 TM7SF3Q9NS93 570 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 FANCLQ9NW38 375 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 ANKRD6Q9Y2G4 727 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 SIK3Q9Y2K2 1263 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 AK5Q9Y6K8 562 aa13.51□□□□□ -0.25
DDX41-204ENST00000504807 A0A0D9SEW6 157 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 EDDM13A0A1B0GTR0 161 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 TARSL2A2RTX5 802 aaKnown RBP13.5□□□□□ -0.25
DDX41-204ENST00000504807 TYW5A2RUC4 315 aaKnown RBP13.5□□□□□ -0.25
DDX41-204ENST00000504807 H0Y8X5 98 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 GOLGA8SH3BPF8 625 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 PES1O00541 588 aaKnown RBP13.5□□□□□ -0.25
DDX41-204ENST00000504807 RNASEH2AO75792 299 aaKnown RBP13.5□□□□□ -0.25
DDX41-204ENST00000504807 GFPT2O94808 682 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 NTRK1P04629 796 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 CTSLP07711 333 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 KRT10P13645 584 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 CD27P26842 260 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 ADPRHP54922 357 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 JAM2P57087 298 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 IL9RQ01113 521 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 FMO1Q01740 532 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 LY6DQ14210 128 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 SHBQ15464 509 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 FAM102AQ5T9C2 384 aaPredicted RBP13.5□□□□□ -0.25
DDX41-204ENST00000504807 RNF219Q5W0B1 726 aaPredicted RBP13.5□□□□□ -0.25
DDX41-204ENST00000504807 Q6ZVU0 165 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 USP30Q70CQ3 517 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 TMEM35BQ8NCS4 154 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 ENOX1Q8TC92 643 aaKnown RBP13.5□□□□□ -0.25
DDX41-204ENST00000504807 BAP1Q92560 729 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 FAM131CQ96AQ9 280 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 STK33Q9BYT3 514 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 PCED1AQ9H1Q7 454 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 FBRSQ9HAH7 460 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 SGK2Q9HBY8 427 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.5□□□□□ -0.25
DDX41-204ENST00000504807 MPP6Q9NZW5 540 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 ADAMTS1Q9UHI8 967 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 TBC1D30Q9Y2I9 924 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 ACTL7AQ9Y615 435 aa13.5□□□□□ -0.25
DDX41-204ENST00000504807 A0A1W2PR77 199 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 DRGXA6NNA5 263 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 E9PAM4 449 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 SMAD6O43541 496 aaKnown RBP13.49□□□□□ -0.25
DDX41-204ENST00000504807 ATP9BO43861 1147 aa13.49□□□□□ -0.25
DDX41-204ENST00000504807 RTN2O75298 545 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms