RNA–Protein interactions for RNA: ENST00000504152.5

DDR1-252, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-252ENST00000504152 ARHGAP42A6NI28 874 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 WASH3PC4AMC7 463 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 SGK1O00141 431 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 DCLK1O15075 740 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 ZBTB24O43167 697 aaPredicted RBP18.61■□□□□ 0.57
DDR1-252ENST00000504152 KDELR3O43731 214 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 ADAM23O75077 832 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 CHRM1P11229 460 aaPredicted RBP18.61■□□□□ 0.57
DDR1-252ENST00000504152 SERPINB6P35237 376 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 CETN2P41208 172 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 IL12RB1P42701 662 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 VASPP50552 380 aaPredicted RBP18.61■□□□□ 0.57
DDR1-252ENST00000504152 RWDD2BP57060 319 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 ENPP2Q13822 863 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 STARD3Q14849 445 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 CRY1Q16526 586 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 EXD1Q8NHP7 514 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 PCDH19Q8TAB3 1148 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 FAF2Q96CS3 445 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 RBM41Q96IZ5 413 aaKnown RBP18.61■□□□□ 0.57
DDR1-252ENST00000504152 MRGPRX3Q96LB0 322 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 GABRG3Q99928 467 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 SLC39A8Q9C0K1 460 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 NOL6Q9H6R4 1146 aaKnown RBP18.61■□□□□ 0.57
DDR1-252ENST00000504152 LRRC19Q9H756 370 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 POLMQ9NP87 494 aaPredicted RBP18.61■□□□□ 0.57
DDR1-252ENST00000504152 VPS51Q9UID3 782 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 SLCO3A1Q9UIG8 710 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 CAPN6Q9Y6Q1 641 aa18.61■□□□□ 0.57
DDR1-252ENST00000504152 ZDBF2Q9HCK1 2354 aa18.6■□□□□ 0.57
DDR1-252ENST00000504152 ZSCAN5CA6NGD5 496 aaPredicted RBP18.6■□□□□ 0.57
DDR1-252ENST00000504152 C3orf70A6NLC5 250 aaPredicted RBP18.6■□□□□ 0.57
DDR1-252ENST00000504152 SYNCRIPO60506 623 aaKnown RBP18.6■□□□□ 0.57
DDR1-252ENST00000504152 SNAP91O60641 907 aa18.6■□□□□ 0.57
DDR1-252ENST00000504152 FTCDO95954 541 aa18.6■□□□□ 0.57
DDR1-252ENST00000504152 HOXB2P14652 356 aa18.6■□□□□ 0.57
DDR1-252ENST00000504152 ZFXP17010 805 aaPredicted RBP18.6■□□□□ 0.57
DDR1-252ENST00000504152 PEX5P50542 639 aa18.6■□□□□ 0.57
DDR1-252ENST00000504152 DGKEP52429 567 aa18.6■□□□□ 0.57
DDR1-252ENST00000504152 GEMIN4P57678 1058 aaKnown RBP18.6■□□□□ 0.57
DDR1-252ENST00000504152 SATB1Q01826 763 aa18.6■□□□□ 0.57
DDR1-252ENST00000504152 SERINC3Q13530 473 aa18.6■□□□□ 0.57
DDR1-252ENST00000504152 ACCSLQ4AC99 568 aa18.6■□□□□ 0.57
DDR1-252ENST00000504152 REXO1L1PQ8IX06 675 aa18.6■□□□□ 0.57
DDR1-252ENST00000504152 CAMKK1Q8N5S9 505 aa18.6■□□□□ 0.57
DDR1-252ENST00000504152 ATP11CQ8NB49 1132 aa18.6■□□□□ 0.57
DDR1-252ENST00000504152 TRIM58Q8NG06 486 aa18.6■□□□□ 0.57
DDR1-252ENST00000504152 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.6■□□□□ 0.57
DDR1-252ENST00000504152 KRT35Q92764 455 aa18.6■□□□□ 0.57
DDR1-252ENST00000504152 HMCESQ96FZ2 354 aa18.6■□□□□ 0.57
DDR1-252ENST00000504152 CELF6Q96J87 481 aaKnown RBP18.6■□□□□ 0.57
DDR1-252ENST00000504152 PRRX2Q99811 253 aa18.6■□□□□ 0.57
DDR1-252ENST00000504152 KLC2Q9H0B6 622 aa18.6■□□□□ 0.57
DDR1-252ENST00000504152 TMEM245Q9H330 911 aa18.6■□□□□ 0.57
DDR1-252ENST00000504152 ETNK2Q9NVF9 386 aa18.6■□□□□ 0.57
DDR1-252ENST00000504152 TRMT1Q9NXH9 659 aaKnown RBP18.6■□□□□ 0.57
DDR1-252ENST00000504152 KMT2EQ8IZD2 1858 aa18.59■□□□□ 0.57
DDR1-252ENST00000504152 GALR2O43603 387 aaPredicted RBP18.59■□□□□ 0.57
DDR1-252ENST00000504152 ZMPSTE24O75844 475 aa18.59■□□□□ 0.57
DDR1-252ENST00000504152 PAPSS2O95340 614 aaPredicted RBP18.59■□□□□ 0.57
DDR1-252ENST00000504152 EPHX1P07099 455 aa18.59■□□□□ 0.57
DDR1-252ENST00000504152 PAPOLAP51003 745 aaKnown RBP18.59■□□□□ 0.57
DDR1-252ENST00000504152 COPS2P61201 443 aa18.59■□□□□ 0.57
DDR1-252ENST00000504152 TFDP2Q14188 446 aa18.59■□□□□ 0.57
DDR1-252ENST00000504152 PAFAH1B3Q15102 231 aaKnown RBP18.59■□□□□ 0.57
DDR1-252ENST00000504152 AFMIDQ63HM1 303 aa18.59■□□□□ 0.57
DDR1-252ENST00000504152 MFSD7Q6UXD7 560 aa18.59■□□□□ 0.57
DDR1-252ENST00000504152 SPOCD1Q6ZMY3 1216 aa18.59■□□□□ 0.57
DDR1-252ENST00000504152 RFX6Q8HWS3 928 aa18.59■□□□□ 0.57
DDR1-252ENST00000504152 CCDC50Q8IVM0 306 aa18.59■□□□□ 0.57
DDR1-252ENST00000504152 FBXO4Q9UKT5 387 aa18.59■□□□□ 0.57
DDR1-252ENST00000504152 HS3ST2Q9Y278 367 aa18.59■□□□□ 0.57
DDR1-252ENST00000504152 TARSL2A2RTX5 802 aaKnown RBP18.58■□□□□ 0.56
DDR1-252ENST00000504152 DFFAO00273 331 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 ATP9BO43861 1147 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 ALDH1A2O94788 518 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 GLDCP23378 1020 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 CDKN2BP42772 138 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 MARCKSL1P49006 195 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 STK19P49842 368 aaPredicted RBP18.58■□□□□ 0.56
DDR1-252ENST00000504152 CSTF1Q05048 431 aaKnown RBP18.58■□□□□ 0.56
DDR1-252ENST00000504152 DLG2Q15700 870 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 TAZQ16635 292 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 TFDP3Q5H9I0 405 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 TMEM92Q6UXU6 159 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 LINGO4Q6UY18 593 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 METTL3Q86U44 580 aaKnown RBP18.58■□□□□ 0.56
DDR1-252ENST00000504152 LRRC49Q8IUZ0 686 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 ARHGAP12Q8IWW6 846 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 SH2D3CQ8N5H7 860 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 PQLC3Q8N755 202 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 TSTD1Q8NFU3 115 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 MYO19Q96H55 970 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 HES6Q96HZ4 224 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 POLR3BQ9NW08 1133 aaPredicted RBP18.58■□□□□ 0.56
DDR1-252ENST00000504152 C2orf42Q9NWW7 574 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 MFHAS1Q9Y4C4 1052 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 CHD5Q8TDI0 1954 aa18.58■□□□□ 0.56
DDR1-252ENST00000504152 GOLGA6L9A6NEM1 432 aa18.57■□□□□ 0.56
DDR1-252ENST00000504152 TTC34A8MYJ7 566 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms