RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 PRICKLE1Q96MT3 831 aaPredicted RBP15.27■□□□□ 0.03
SNF8-203ENST00000504000 C16orf70Q9BSU1 422 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 DUSP16Q9BY84 665 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 SHCBP1LQ9BZQ2 653 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 GBA3Q9H227 469 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 SNX25Q9H3E2 840 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 MAN1C1Q9NR34 630 aa15.27■□□□□ 0.03
SNF8-203ENST00000504000 PIH1D1Q9NWS0 290 aaKnown RBP15.27■□□□□ 0.03
SNF8-203ENST00000504000 H0YJX3 145 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 TFEBP19484 476 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 NUDT2P50583 147 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 ADGRE1Q14246 886 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 TLR1Q15399 786 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 LSM12Q3MHD2 195 aaKnown RBP15.26■□□□□ 0.03
SNF8-203ENST00000504000 DCAF6Q58WW2 860 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 CES3Q6UWW8 571 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 PIGZQ86VD9 579 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 KCNMB4Q86W47 210 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 HDAC11Q96DB2 347 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 VPS39Q96JC1 886 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 LRGUKQ96M69 825 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 NDNQ99608 321 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 C1QTNF1Q9BXJ1 281 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 OXCT2Q9BYC2 517 aaPredicted RBP15.26■□□□□ 0.03
SNF8-203ENST00000504000 ACE2Q9BYF1 805 aaPredicted RBP15.26■□□□□ 0.03
SNF8-203ENST00000504000 ZNF696Q9H7X3 374 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 MRM3Q9HC36 420 aaKnown RBP15.26■□□□□ 0.03
SNF8-203ENST00000504000 TXNRD2Q9NNW7 524 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 VTA1Q9NP79 307 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 PTTG2Q9NZH5 202 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 HACD3Q9P035 362 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 SEPT10Q9P0V9 454 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 RIMS3Q9UJD0 308 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 PADI4Q9UM07 663 aa15.26■□□□□ 0.03
SNF8-203ENST00000504000 MYO18AQ92614 2054 aaKnown RBP15.26■□□□□ 0.03
SNF8-203ENST00000504000 C9IYK1 514 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 BTBD19C9JJ37 291 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 PSMD3O43242 534 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 XPOTO43592 962 aaKnown RBP15.25■□□□□ 0.03
SNF8-203ENST00000504000 PENKP01210 267 aaPredicted RBP15.25■□□□□ 0.03
SNF8-203ENST00000504000 SMIM18P0DKX4 95 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 LMO2P25791 158 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 ADRA1BP35368 520 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 SERPINB5P36952 375 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 PSMD8P48556 350 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 GJA9P57773 515 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 ZNF33AQ06730 810 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 FLOT2Q14254 428 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 Q3C1V9 767 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 HSP90AA5PQ58FG0 334 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 MARCH8Q5T0T0 291 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 TAPT1Q6NXT6 567 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 NOTUMQ6P988 496 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 ERO1BQ86YB8 467 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 STYXQ8WUJ0 223 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 OPTNQ96CV9 577 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 TSNARE1Q96NA8 513 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 AGAP3Q96P47 875 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 AGAP2Q99490 1192 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 RHOJQ9H4E5 214 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 EFCAB1Q9HAE3 211 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.25■□□□□ 0.03
SNF8-203ENST00000504000 CAPN8A6NHC0 703 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 TARM1B6A8C7 271 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 F5H423 210 aaPredicted RBP15.25■□□□□ 0.03
SNF8-203ENST00000504000 H3BRB1 525 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 AIM2O14862 343 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 GRID2O43424 1007 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 STRNO43815 780 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 BCAS2O75934 225 aaPredicted RBP15.25■□□□□ 0.03
SNF8-203ENST00000504000 DDHD2O94830 711 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 TNFAIP8O95379 198 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 PDGFRBP09619 1106 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 HSPA1AP0DMV8 641 aaKnown RBP15.25■□□□□ 0.03
SNF8-203ENST00000504000 HSPA1BP0DMV9 641 aaKnown RBP15.25■□□□□ 0.03
SNF8-203ENST00000504000 ME2P23368 584 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 IRF9Q00978 393 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 NSUN2Q08J23 767 aaKnown RBP eCLIP15.25■□□□□ 0.03
SNF8-203ENST00000504000 ADIGQ0VDE8 80 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 R3HDM1Q15032 1099 aaKnown RBP15.25■□□□□ 0.03
SNF8-203ENST00000504000 ADRM1Q16186 407 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 CNGA3Q16281 694 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 XKR4Q5GH76 650 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 MAMDC4Q6UXC1 1216 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 ARMCX2Q7L311 632 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 SNX32Q86XE0 403 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 DNAAF3Q8N9W5 541 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 HIPK4Q8NE63 616 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 APPL2Q8NEU8 664 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 CNKSR2Q8WXI2 1034 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 C18orf25Q96B23 403 aaPredicted RBP15.25■□□□□ 0.03
SNF8-203ENST00000504000 FAM149B1Q96BN6 582 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 PGAP3Q96FM1 320 aaPredicted RBP15.25■□□□□ 0.03
SNF8-203ENST00000504000 GCNAQ96QF7 691 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 PPP1R16BQ96T49 567 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 LPIN3Q9BQK8 851 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 KIFC1Q9BW19 673 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 CEP41Q9BYV8 373 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 CXCL16Q9H2A7 254 aa15.25■□□□□ 0.03
SNF8-203ENST00000504000 TUT1Q9H6E5 874 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms