RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 ZNF548Q8NEK5 533 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 WDR48Q8TAF3 677 aa16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 FCRL2Q96LA5 508 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 NOX5Q96PH1 765 aa16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 CSNK1G3Q9Y6M4 447 aa16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 TEX15Q9BXT5 2789 aa16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 TRPM6Q9BX84 2022 aa16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 A6NNZ2 444 aa16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 MCF2LO15068 1137 aa16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 MOCS2O96007 188 aaPredicted RBP16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 LTFP02788 710 aa16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 SETSIPP0DME0 302 aa16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 CD19P15391 556 aa16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 NUMBP49757 651 aa16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 NR0B2Q15466 257 aa16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 ZNF284Q2VY69 593 aa16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 KRT39Q6A163 491 aa16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 GCNT7Q6ZNI0 430 aa16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 Q6ZSR6 202 aa16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 ABI3BPQ7Z7G0 1075 aa16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 C14orf80Q86SX3 495 aa16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 HORMAD1Q86X24 394 aa16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 ERCC4Q92889 916 aaPredicted RBP16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 SERPINB11Q96P15 392 aa16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 EXOC1Q9NV70 894 aa16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 SLC25A13Q9UJS0 675 aa16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 TLR6Q9Y2C9 796 aa16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 PCDHGA7Q9Y5G6 932 aa16.27■□□□□ 0.2
PDLIM7-210ENST00000503827 CUTAO60888 179 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 CSF2P04141 144 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 PDGFRAP16234 1089 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 CR2P20023 1033 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 SYT1P21579 422 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 SLC5A2P31639 672 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 RPIAP49247 311 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 VASPP50552 380 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 ENPEPQ07075 957 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 SERINC3Q13530 473 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 SPIDRQ14159 915 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 PIP5KL1Q5T9C9 394 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 OR6B2Q6IFH4 312 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 SHC4Q6S5L8 630 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 PTAR1Q7Z6K3 402 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 JAMLQ86YT9 394 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 FAM186BQ8IYM0 893 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 ZSCAN1Q8NBB4 408 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 SEMA4DQ92854 862 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 GLMNQ92990 594 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 PPP1R9BQ96SB3 815 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 IL12RB2Q99665 862 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 SLC25A18Q9H1K4 315 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 ZSCAN16Q9H4T2 348 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 FLNCQ14315 2725 aa16.26■□□□□ 0.19
PDLIM7-210ENST00000503827 PIK3R2O00459 728 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 TPP1O14773 563 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 PLD2O14939 933 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 MUSKO15146 869 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 AQP9O43315 295 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 ATP9BO43861 1147 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 KLRC4O43908 158 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 BNIP3LO60238 219 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 NOBOXO60393 691 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 APOEP02649 317 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 VDRP11473 427 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 NME1P15531 152 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 NR2F2P24468 414 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 GTF2H1P32780 548 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 RGS7P49802 495 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 PLK1P53350 603 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 OXCT1P55809 520 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 NNTQ13423 1086 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 TGIF1Q15583 401 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 DLG2Q15700 870 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 DEFB133Q30KQ1 61 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 PERM1Q5SV97 790 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 RAP1GAP2Q684P5 730 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 CHSY1Q86X52 802 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 FBXO39Q8N4B4 442 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 FBXL13Q8NEE6 735 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 NAT6Q93015 286 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 RNF34Q969K3 372 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 LIN37Q96GY3 246 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 SLC39A13Q96H72 371 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 SYNDIG1Q9H7V2 258 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 DYRK4Q9NR20 520 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 RAB20Q9NX57 234 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 SEPT10Q9P0V9 454 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 IPO11Q9UI26 975 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 DACH1Q9UI36 760 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 TRAF3IP3Q9Y228 551 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 FARP1Q9Y4F1 1045 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 HS3ST3A1Q9Y663 406 aa16.25■□□□□ 0.19
PDLIM7-210ENST00000503827 TLN1Q9Y490 2541 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-210ENST00000503827 SCN8AQ9UQD0 1980 aa16.24■□□□□ 0.19
PDLIM7-210ENST00000503827 PCDH8O95206 1070 aa16.24■□□□□ 0.19
PDLIM7-210ENST00000503827 LIPCP11150 499 aa16.24■□□□□ 0.19
PDLIM7-210ENST00000503827 TACR2P21452 398 aa16.24■□□□□ 0.19
PDLIM7-210ENST00000503827 SRSF6Q13247 344 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-210ENST00000503827 EIF3IQ13347 325 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-210ENST00000503827 FZD2Q14332 565 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms