RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 IPPQ9Y573 584 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 FAM237BA0A1B0GVD1 139 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 GNG14A0A1W2PPG7 69 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 OPLAHO14841 1288 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 C11orf96Q7Z7L8 435 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 EID3Q8N140 333 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 ACMSDQ8TDX5 336 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 UGT2B28Q9BY64 529 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 ACSS3Q9H6R3 686 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 ATP13A1Q9HD20 1204 aa16.42■□□□□ 0.22
HMGXB3-202ENST00000503427 TRUB2O95900 331 aaKnown RBP16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 PGK1P00558 417 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 USP17L7P0C7H9 530 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 GPC1P35052 558 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 ANKRD52Q8NB46 1076 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 FIG4Q92562 907 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 RNF157Q96PX1 679 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 PIF1Q9H611 641 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 KRT84Q9NSB2 600 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 DERAQ9Y315 318 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 ERVK-10P10266 1014 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 TNFSF9P41273 254 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 MMP13P45452 471 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 NOMO3P69849 1222 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 SLC20A2Q08357 652 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 SHROOM1Q2M3G4 852 aaPredicted RBP16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 OTUD3Q5T2D3 398 aaPredicted RBP16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 FAM45BPQ6NSW5 357 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 TFAP2DQ7Z6R9 452 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 FAM126BQ8IXS8 530 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 B3GALNT2Q8NCR0 500 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 GPR20Q99678 358 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 PDGFDQ9GZP0 370 aaPredicted RBP16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 TKTL2Q9H0I9 626 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 CCNT2O60583 730 aaKnown RBP16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 ENDOD1O94919 500 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 ZNF7P17097 686 aaPredicted RBP16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 PPIDQ08752 370 aaKnown RBP16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 C15orf59Q2T9L4 293 aaPredicted RBP16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 TMEM26Q6ZUK4 368 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 SH3BP5LQ7L8J4 393 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 ZNF467Q7Z7K2 595 aaPredicted RBP16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 OR5B17Q8NGF7 314 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 CAMKK2Q96RR4 588 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 hCG_1818297A0A087WSY0 165 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 RNF225M0QZC1 329 aaPredicted RBP16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 ZNF280AP59817 542 aaPredicted RBP16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 KCNJ2P63252 427 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 RASGEF1CQ8N431 466 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 DHRSXQ8N5I4 330 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 ADAM32Q8TC27 787 aa16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 KRCC1Q9NPI7 259 aaPredicted RBP16.41■□□□□ 0.22
HMGXB3-202ENST00000503427 FGF10O15520 208 aaPredicted RBP16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 ADCY6O43306 1168 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 SYNCRIPO60506 623 aaKnown RBP16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 CCNE2O96020 404 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 CKBP12277 381 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 ATP13A4Q4VNC1 1196 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 CYP2R1Q6VVX0 501 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 METTL6Q8TCB7 284 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 PYDC1Q8WXC3 89 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 LRMDAQ9H2I8 198 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 WDR41Q9HAD4 459 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 PLA2G4CQ9UP65 541 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 GIT1Q9Y2X7 761 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 A0A087WXM4 84 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 SMIM35A0A1B0GVV1 85 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 USP12O75317 370 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 KLRC2P26717 231 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 TRIP4Q15650 581 aaPredicted RBP16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 PABPC1LQ4VXU2 614 aaKnown RBP16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 PCID2Q5JVF3 399 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 LUZP2Q86TE4 346 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 PALB2Q86YC2 1186 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 SLC44A2Q8IWA5 706 aaPredicted RBP16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 SVOPQ8N4V2 548 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 COPS7BQ9H9Q2 264 aaPredicted RBP16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 PHLPP1O60346 1717 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 USP2O75604 605 aaPredicted RBP16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 POU1F1P28069 291 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 NCF4Q15080 339 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 ACBD5Q5T8D3 534 aaPredicted RBP16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 NPNTQ6UXI9 565 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 SETD9Q8NE22 299 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 HES2Q9Y543 173 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 ZNF541Q9H0D2 1346 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 MSH3P20585 1137 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 ICAM3P32942 547 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 EEF1DP3Q658K8 133 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 NEPROQ6NW34 567 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 SEMA4DQ92854 862 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 CERS2Q96G23 380 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 RNF145Q96MT1 663 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 ST6GALNAC4Q9H4F1 302 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 HPS4Q9NQG7 708 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 RIPK3Q9Y572 518 aa16.4■□□□□ 0.22
HMGXB3-202ENST00000503427 ALOX15BO15296 676 aa16.39■□□□□ 0.22
HMGXB3-202ENST00000503427 PHGDHO43175 533 aaKnown RBP16.39■□□□□ 0.22
HMGXB3-202ENST00000503427 CALCAP01258 141 aa16.39■□□□□ 0.22
HMGXB3-202ENST00000503427 EPB42P16452 691 aa16.39■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms