RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 AGAP9Q5VTM2 703 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 FAM171BQ6P995 826 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 SAPCD2Q86UD0 394 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 PIWIL2Q8TC59 973 aaKnown RBP7.55□□□□□ -1.2
PDGFC-203ENST00000502773 USP33Q8TEY7 942 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 PTPRN2Q92932 1015 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 OXNAD1Q96HP4 312 aaPredicted RBP7.55□□□□□ -1.2
PDGFC-203ENST00000502773 KCNK16Q96T55 309 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 TBL1YQ9BQ87 522 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 SPATA7Q9P0W8 599 aa7.55□□□□□ -1.2
PDGFC-203ENST00000502773 MAGED2Q9UNF1 606 aaPredicted RBP7.55□□□□□ -1.2
PDGFC-203ENST00000502773 MATN3O15232 486 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 TP73O15350 636 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 INPPL1O15357 1258 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 DDHD2O94830 711 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 ALDH2P05091 517 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 RALBP11234 206 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 IL4RP24394 825 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 LMO2P25791 158 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 SLC26A3P40879 764 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 RABGAP1LQ5R372 815 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 PRAMEF19Q5SWL8 479 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 METTL3Q86U44 580 aaKnown RBP7.54□□□□□ -1.2
PDGFC-203ENST00000502773 SCN4BQ8IWT1 228 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 EFHBQ8N7U6 833 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 RAET1EQ8TD07 263 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 PDCD6IPQ8WUM4 868 aaKnown RBP7.54□□□□□ -1.2
PDGFC-203ENST00000502773 SPOCK2Q92563 424 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 PCED1BQ96HM7 432 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 ZNF599Q96NL3 588 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 GORASP1Q9BQQ3 440 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 TMEM175Q9BSA9 504 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 TMEM120AQ9BXJ8 343 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 SMOC2Q9H3U7 446 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 DPEP3Q9H4B8 488 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 Q9H521 79 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 CASS4Q9NQ75 786 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 TJP2Q9UDY2 1190 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 MAFFQ9ULX9 164 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 SSX2IPQ9Y2D8 614 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 ACOT9Q9Y305 439 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 WDR27A2RRH5 827 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 DCLK1O15075 740 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 ITGA2BP08514 1039 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 IMPDH2P12268 514 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 CYBAP13498 195 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 MGAT1P26572 445 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 MAPKAPK2P49137 400 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 SLC11A2P49281 568 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 LIMK2P53671 638 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 HNRNPDQ14103 355 aaKnown RBP7.54□□□□□ -1.2
PDGFC-203ENST00000502773 FASTKD3Q14CZ7 662 aaKnown RBP7.54□□□□□ -1.2
PDGFC-203ENST00000502773 SLC1A5Q15758 541 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 UPP1Q16831 310 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 PARP15Q460N3 678 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 HSP90AA5PQ58FG0 334 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 ANKS3Q6ZW76 656 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 STRA8Q7Z7C7 330 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 KCNMB4Q86W47 210 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 CATSPER1Q8NEC5 780 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 CASP10Q92851 521 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 IFT43Q96FT9 208 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 YIPF2Q9BWQ6 316 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 ABCF3Q9NUQ8 709 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 DNAJC28Q9NX36 388 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 INPP5FQ9Y2H2 1132 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 A0A1W2PPM1 405 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 DNM1LO00429 736 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 GIPC1O14908 333 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 MAGEC1O60732 1142 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 USP17L7P0C7H9 530 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 THRAP10827 490 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 YWHAQP27348 245 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 CLCN2P51788 898 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 TBX4P57082 545 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 POU4F1Q01851 419 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 CREMQ03060 361 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 BTG3Q14201 252 aaPredicted RBP7.54□□□□□ -1.2
PDGFC-203ENST00000502773 SLC14A2Q15849 920 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 FASTKD1Q53R41 847 aaKnown RBP7.54□□□□□ -1.2
PDGFC-203ENST00000502773 C16orf89Q6UX73 402 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 CAND1Q86VP6 1230 aaKnown RBP7.54□□□□□ -1.2
PDGFC-203ENST00000502773 CCDC185Q8N715 623 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 GLIS1Q8NBF1 620 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 C10orf82Q8WW14 230 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 OVCA2Q8WZ82 227 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 TRMOQ9BU70 441 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 MYLK2Q9H1R3 596 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 RHOJQ9H4E5 214 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 EPS15L1Q9UBC2 864 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 DNAJB4Q9UDY4 337 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 DCTN4Q9UJW0 460 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 SCML2Q9UQR0 700 aa7.54□□□□□ -1.2
PDGFC-203ENST00000502773 WASH4PA8MWX3 477 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 PEX14O75381 377 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 UPP2O95045 317 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 PAPSS2O95340 614 aaPredicted RBP7.53□□□□□ -1.2
PDGFC-203ENST00000502773 STMN1P16949 149 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 PTPN3P26045 913 aa7.53□□□□□ -1.2
PDGFC-203ENST00000502773 PSMB4P28070 264 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms