RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 CSTF2P33240 577 aaKnown RBP eCLIP3.86□□□□□ -1.79
SUB1-202ENST00000502453 HNF1BP35680 557 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 MAP2K2P36507 400 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 PTDSS1P48651 473 aaKnown RBP3.86□□□□□ -1.79
SUB1-202ENST00000502453 METAP1P53582 386 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 GALK2Q01415 458 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 ROM1Q03395 351 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 MTX1Q13505 466 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 KCNJ12Q14500 433 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 ZMYND11Q15326 602 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 KCNT1Q5JUK3 1230 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 CYP4A22Q5TCH4 519 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 KRT28Q7Z3Y7 464 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 GLB1L2Q8IW92 636 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 UNC5BQ8IZJ1 945 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 MAML2Q8IZL2 1156 aaPredicted RBP3.86□□□□□ -1.79
SUB1-202ENST00000502453 PQLC1Q8N2U9 271 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 CDYL2Q8N8U2 506 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 LPCAT1Q8NF37 534 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 GPR156Q8NFN8 814 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 WDR48Q8TAF3 677 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 ARHGAP45Q92619 1136 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 RRNAD1Q96FB5 475 aaKnown RBP3.86□□□□□ -1.79
SUB1-202ENST00000502453 ATP6V1G3Q96LB4 118 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 LINC00615Q96LM1 132 aaPredicted RBP3.86□□□□□ -1.79
SUB1-202ENST00000502453 HS6ST2Q96MM7 605 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 MED15Q96RN5 788 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 RIOK1Q9BRS2 568 aaKnown RBP3.86□□□□□ -1.79
SUB1-202ENST00000502453 NTMT1Q9BV86 223 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.86□□□□□ -1.79
SUB1-202ENST00000502453 BICC1Q9H694 974 aaKnown RBP3.86□□□□□ -1.79
SUB1-202ENST00000502453 MRPL44Q9H9J2 332 aaKnown RBP3.86□□□□□ -1.79
SUB1-202ENST00000502453 USP40Q9NVE5 1235 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 TARBP1Q13395 1621 aaKnown RBP3.86□□□□□ -1.79
SUB1-202ENST00000502453 TRBV23OR9-2A0A075B6M9 112 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 GOLGA6L7A0A1B0GV03 622 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 E9PBE3 544 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 H3BM21 787 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 HDAC3O15379 428 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 CAPN5O15484 640 aaPredicted RBP3.86□□□□□ -1.79
SUB1-202ENST00000502453 TTI1O43156 1089 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 CA12O43570 354 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 TACC1O75410 805 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 SCAF4O95104 1147 aaKnown RBP3.86□□□□□ -1.79
SUB1-202ENST00000502453 NTSR2O95665 410 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 GRPP07492 148 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 ATP5JP18859 108 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 CCR1P32246 355 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 ASPAP45381 313 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 ARHGDIBP52566 201 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 PMP22Q01453 160 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 ALCAMQ13740 583 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 DOC2AQ14183 400 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 IL11RAQ14626 422 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 ZSCAN23Q3MJ62 389 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 IFI44LQ53G44 452 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 HS1BP3Q53T59 392 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 DGAT2L7PQ6IED9 249 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 FAM180AQ6UWF9 173 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 MAMDC4Q6UXC1 1216 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.86□□□□□ -1.79
SUB1-202ENST00000502453 PROSER1Q86XN7 944 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 LSMEM2Q8N112 164 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 BBS5Q8N3I7 341 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 NHLRC2Q8NBF2 726 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 WASF1Q92558 559 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 HES6Q96HZ4 224 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 KLHL15Q96M94 604 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 MTMR9Q96QG7 549 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 CLPBQ9H078 707 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 TRPV6Q9H1D0 765 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 SLC25A32Q9H2D1 315 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 CCDC134Q9H6E4 229 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 C19orf44Q9H6X5 657 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 C8orf33Q9H7E9 229 aaPredicted RBP3.86□□□□□ -1.79
SUB1-202ENST00000502453 NRDE2Q9H7Z3 1164 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 MANSC1Q9H8J5 431 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 GORASP2Q9H8Y8 452 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 UPF2Q9HAU5 1272 aaKnown RBP3.86□□□□□ -1.79
SUB1-202ENST00000502453 CENPMQ9NSP4 180 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 KCND2Q9NZV8 630 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 ASH2LQ9UBL3 628 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 SLCO3A1Q9UIG8 710 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 RCOR1Q9UKL0 485 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 ATXN7L1Q9ULK2 861 aaPredicted RBP3.86□□□□□ -1.79
SUB1-202ENST00000502453 CLEC4AQ9UMR7 237 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 HPSEQ9Y251 543 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 STK38LQ9Y2H1 464 aa3.86□□□□□ -1.79
SUB1-202ENST00000502453 ABLIM1O14639 778 aa3.85□□□□□ -1.79
SUB1-202ENST00000502453 DYRK3O43781 588 aa3.85□□□□□ -1.79
SUB1-202ENST00000502453 TAF5LO75529 589 aa3.85□□□□□ -1.79
SUB1-202ENST00000502453 TFRCP02786 760 aaKnown RBP3.85□□□□□ -1.79
SUB1-202ENST00000502453 TUBB4BP68371 445 aa3.85□□□□□ -1.79
SUB1-202ENST00000502453 CTBSQ01459 385 aa3.85□□□□□ -1.79
SUB1-202ENST00000502453 CYP27C1Q4G0S4 372 aa3.85□□□□□ -1.79
SUB1-202ENST00000502453 ANKRD40Q6AI12 368 aa3.85□□□□□ -1.79
SUB1-202ENST00000502453 PMF1Q6P1K2 205 aa3.85□□□□□ -1.79
SUB1-202ENST00000502453 KLC3Q6P597 504 aa3.85□□□□□ -1.79
SUB1-202ENST00000502453 MOXD1Q6UVY6 613 aa3.85□□□□□ -1.79
SUB1-202ENST00000502453 Q6ZVL8 140 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms