RNA–Protein interactions for RNA: ENST00000499045.2

CHFR-206, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 505 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-206ENST00000499045 STK40Q8N2I9 435 aa25.87■■□□□ 1.73
CHFR-206ENST00000499045 EPAS1Q99814 870 aa25.87■■□□□ 1.73
CHFR-206ENST00000499045 SNRNP25Q9BV90 132 aaKnown RBP25.87■■□□□ 1.73
CHFR-206ENST00000499045 NUP85Q9BW27 656 aa25.87■■□□□ 1.73
CHFR-206ENST00000499045 GPATCH2LQ9NWQ4 482 aa25.87■■□□□ 1.73
CHFR-206ENST00000499045 PCSK1NQ9UHG2 260 aa25.87■■□□□ 1.73
CHFR-206ENST00000499045 USP18Q9UMW8 372 aa25.87■■□□□ 1.73
CHFR-206ENST00000499045 AP4E1Q9UPM8 1137 aa25.87■■□□□ 1.73
CHFR-206ENST00000499045 CEP250Q9BV73 2442 aa25.86■■□□□ 1.73
CHFR-206ENST00000499045 WASH4PA8MWX3 477 aa25.86■■□□□ 1.73
CHFR-206ENST00000499045 EIF3CLB5ME19 914 aaKnown RBP25.86■■□□□ 1.73
CHFR-206ENST00000499045 DNTTP04053 509 aa25.86■■□□□ 1.73
CHFR-206ENST00000499045 ZNF806P0C7X5 589 aa25.86■■□□□ 1.73
CHFR-206ENST00000499045 GLDCP23378 1020 aa25.86■■□□□ 1.73
CHFR-206ENST00000499045 HTR7P34969 479 aa25.86■■□□□ 1.73
CHFR-206ENST00000499045 NUMA1Q14980 2115 aa25.86■■□□□ 1.73
CHFR-206ENST00000499045 DLG2Q15700 870 aa25.86■■□□□ 1.73
CHFR-206ENST00000499045 CCDC6Q16204 474 aa25.86■■□□□ 1.73
CHFR-206ENST00000499045 PSTKQ8IV42 348 aaKnown RBP25.86■■□□□ 1.73
CHFR-206ENST00000499045 SLC41A1Q8IVJ1 513 aa25.86■■□□□ 1.73
CHFR-206ENST00000499045 NIPA2Q8N8Q9 360 aa25.86■■□□□ 1.73
CHFR-206ENST00000499045 RTL3Q8N8U3 475 aaKnown RBP25.86■■□□□ 1.73
CHFR-206ENST00000499045 ZNF419Q96HQ0 510 aaPredicted RBP25.86■■□□□ 1.73
CHFR-206ENST00000499045 MRFAP1L1Q96HT8 127 aa25.86■■□□□ 1.73
CHFR-206ENST00000499045 EIF3CQ99613 913 aaKnown RBP25.86■■□□□ 1.73
CHFR-206ENST00000499045 SPON2Q9BUD6 331 aa25.86■■□□□ 1.73
CHFR-206ENST00000499045 PACSIN1Q9BY11 444 aa25.86■■□□□ 1.73
CHFR-206ENST00000499045 NOL6Q9H6R4 1146 aaKnown RBP25.86■■□□□ 1.73
CHFR-206ENST00000499045 ATP13A1Q9HD20 1204 aa25.86■■□□□ 1.73
CHFR-206ENST00000499045 DNAI1Q9UI46 699 aa25.86■■□□□ 1.73
CHFR-206ENST00000499045 CXorf51AA0A1B0GTR3 108 aa25.85■■□□□ 1.73
CHFR-206ENST00000499045 CREB3O43889 395 aa25.85■■□□□ 1.73
CHFR-206ENST00000499045 PRPSAP2O60256 369 aa25.85■■□□□ 1.73
CHFR-206ENST00000499045 ACVRL1P37023 503 aa25.85■■□□□ 1.73
CHFR-206ENST00000499045 ETFBP38117 255 aa25.85■■□□□ 1.73
CHFR-206ENST00000499045 CLCN6P51797 869 aa25.85■■□□□ 1.73
CHFR-206ENST00000499045 PIGHQ14442 188 aaPredicted RBP25.85■■□□□ 1.73
CHFR-206ENST00000499045 ELAVL3Q14576 367 aaKnown RBP25.85■■□□□ 1.73
CHFR-206ENST00000499045 DAB2IPQ5VWQ8 1189 aa25.85■■□□□ 1.73
CHFR-206ENST00000499045 LYSMD4Q5XG99 296 aa25.85■■□□□ 1.73
CHFR-206ENST00000499045 PRR23CQ6ZRP0 262 aa25.85■■□□□ 1.73
CHFR-206ENST00000499045 ARMCX6Q7L4S7 300 aa25.85■■□□□ 1.73
CHFR-206ENST00000499045 CYP2U1Q7Z449 544 aa25.85■■□□□ 1.73
CHFR-206ENST00000499045 DEFB119Q8N690 84 aa25.85■■□□□ 1.73
CHFR-206ENST00000499045 TC2NQ8N9U0 490 aa25.85■■□□□ 1.73
CHFR-206ENST00000499045 ARHGEF2Q92974 986 aaKnown RBP25.85■■□□□ 1.73
CHFR-206ENST00000499045 MAGEH1Q9H213 219 aa25.85■■□□□ 1.73
CHFR-206ENST00000499045 PABPC3Q9H361 631 aaKnown RBP25.85■■□□□ 1.73
CHFR-206ENST00000499045 DEF6Q9H4E7 631 aa25.85■■□□□ 1.73
CHFR-206ENST00000499045 NHEJ1Q9H9Q4 299 aaPredicted RBP25.85■■□□□ 1.73
CHFR-206ENST00000499045 VPS45Q9NRW7 570 aa25.85■■□□□ 1.73
CHFR-206ENST00000499045 ANAPC7Q9UJX3 599 aa25.85■■□□□ 1.73
CHFR-206ENST00000499045 SCML1Q9UN30 329 aa25.85■■□□□ 1.73
CHFR-206ENST00000499045 K7ERQ8 282 aa25.84■■□□□ 1.73
CHFR-206ENST00000499045 CBX4O00257 560 aa25.84■■□□□ 1.73
CHFR-206ENST00000499045 AKR1B10O60218 316 aa25.84■■□□□ 1.73
CHFR-206ENST00000499045 RNASEH1O60930 286 aaKnown RBP25.84■■□□□ 1.73
CHFR-206ENST00000499045 NDUFS2O75306 463 aa25.84■■□□□ 1.73
CHFR-206ENST00000499045 ARF5P84085 180 aa25.84■■□□□ 1.73
CHFR-206ENST00000499045 ZNF33AQ06730 810 aa25.84■■□□□ 1.73
CHFR-206ENST00000499045 SLC20A2Q08357 652 aa25.84■■□□□ 1.73
CHFR-206ENST00000499045 CST6Q15828 149 aa25.84■■□□□ 1.73
CHFR-206ENST00000499045 ACCSLQ4AC99 568 aa25.84■■□□□ 1.73
CHFR-206ENST00000499045 PEAR1Q5VY43 1037 aaPredicted RBP25.84■■□□□ 1.73
CHFR-206ENST00000499045 LINGO4Q6UY18 593 aa25.84■■□□□ 1.73
CHFR-206ENST00000499045 MMAAQ8IVH4 418 aaKnown RBP25.84■■□□□ 1.73
CHFR-206ENST00000499045 ATP11CQ8NB49 1132 aa25.84■■□□□ 1.73
CHFR-206ENST00000499045 BTBD6Q96KE9 485 aa25.84■■□□□ 1.73
CHFR-206ENST00000499045 DHX35Q9H5Z1 703 aaKnown RBP25.84■■□□□ 1.73
CHFR-206ENST00000499045 IP6K2Q9UHH9 426 aa25.84■■□□□ 1.73
CHFR-206ENST00000499045 DYNC1LI1Q9Y6G9 523 aaKnown RBP25.84■■□□□ 1.73
CHFR-206ENST00000499045 FGF10O15520 208 aaPredicted RBP25.83■■□□□ 1.73
CHFR-206ENST00000499045 SMAD6O43541 496 aaKnown RBP25.83■■□□□ 1.73
CHFR-206ENST00000499045 FOXD2O60548 495 aaPredicted RBP25.83■■□□□ 1.73
CHFR-206ENST00000499045 RAMP2O60895 175 aa25.83■■□□□ 1.73
CHFR-206ENST00000499045 TCF4P15884 667 aa25.83■■□□□ 1.73
CHFR-206ENST00000499045 ITPKAP23677 461 aa25.83■■□□□ 1.73
CHFR-206ENST00000499045 IL1R2P27930 398 aa25.83■■□□□ 1.73
CHFR-206ENST00000499045 TTC31Q49AM3 519 aaPredicted RBP25.83■■□□□ 1.73
CHFR-206ENST00000499045 RETSATQ6NUM9 610 aa25.83■■□□□ 1.73
CHFR-206ENST00000499045 Q6ZVU0 165 aa25.83■■□□□ 1.73
CHFR-206ENST00000499045 USP30Q70CQ3 517 aa25.83■■□□□ 1.73
CHFR-206ENST00000499045 SYT12Q8IV01 421 aa25.83■■□□□ 1.73
CHFR-206ENST00000499045 CADM4Q8NFZ8 388 aa25.83■■□□□ 1.73
CHFR-206ENST00000499045 CCDC42Q96M95 316 aa25.83■■□□□ 1.73
CHFR-206ENST00000499045 KCTD15Q96SI1 283 aaPredicted RBP25.83■■□□□ 1.73
CHFR-206ENST00000499045 GPR174Q9BXC1 333 aa25.83■■□□□ 1.73
CHFR-206ENST00000499045 SMOC1Q9H4F8 434 aa25.83■■□□□ 1.73
CHFR-206ENST00000499045 CATSPERBQ9H7T0 1116 aa25.83■■□□□ 1.73
CHFR-206ENST00000499045 TMEM74BQ9NUR3 256 aa25.83■■□□□ 1.73
CHFR-206ENST00000499045 PILRBQ9UKJ0 227 aa25.83■■□□□ 1.73
CHFR-206ENST00000499045 MCF2LO15068 1137 aa25.82■■□□□ 1.72
CHFR-206ENST00000499045 MID1O15344 667 aa25.82■■□□□ 1.72
CHFR-206ENST00000499045 ZNF821O75541 412 aaPredicted RBP25.82■■□□□ 1.72
CHFR-206ENST00000499045 CD160O95971 181 aa25.82■■□□□ 1.72
CHFR-206ENST00000499045 H2AFZP0C0S5 128 aa25.82■■□□□ 1.72
CHFR-206ENST00000499045 SLC8A1P32418 973 aa25.82■■□□□ 1.72
CHFR-206ENST00000499045 ACSL1P33121 698 aa25.82■■□□□ 1.72
CHFR-206ENST00000499045 SERPINH1P50454 418 aaKnown RBP25.82■■□□□ 1.72
CHFR-206ENST00000499045 TPI1P60174 286 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms