RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 C16orf70Q9BSU1 422 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 CABLES2Q9BTV7 478 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 C2orf49Q9BVC5 232 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 TRIM2Q9C040 744 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ZMYND15Q9H091 742 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ZCWPW1Q9H0M4 648 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 TUBB1Q9H4B7 451 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 EPB41L1Q9H4G0 881 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 GSTO2Q9H4Y5 243 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 DENND2DQ9H6A0 471 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 DCLRE1BQ9H816 532 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 EXOSC3Q9NQT5 275 aaKnown RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 C1orf112Q9NSG2 853 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 AGPAT5Q9NUQ2 364 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 SAP30BPQ9UHR5 308 aaKnown RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 B3GNT3Q9Y2A9 372 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 FBXO7Q9Y3I1 522 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 PCDHGB7Q9Y5F8 929 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 LY75O60449 1722 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 CCDC163A0A0D9SF12 145 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ANKRD30BLA7E2S9 258 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 METTL12A8MUP2 240 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 VWC2LB2RUY7 222 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 SEPT4O43236 478 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 MOSPD3O75425 235 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 SLC22A3O75751 556 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 CNTN5O94779 1100 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 BAG3O95817 575 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 CKMP06732 381 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 FAM200BP0CF97 657 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ZNF26P17031 533 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 GJA1P17302 382 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ELK1P19419 428 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 PI3P19957 117 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 POU3F2P20265 443 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 GBP2P32456 591 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 HNF1BP35680 557 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ATP5C1P36542 298 aaKnown RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 ARCN1P48444 511 aaKnown RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 CDK7P50613 346 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 NRG3P56975 720 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 HILS1P60008 231 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 KCNJ10P78508 379 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 HSF2Q03933 536 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ZP2Q05996 745 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 PCDH1Q08174 1060 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 HYAL1Q12794 435 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 FZD5Q13467 585 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 CUL2Q13617 745 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 RBM39Q14498 530 aaKnown RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 COBLL1Q53SF7 1204 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 LCE2AQ5TA79 106 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 STPG1Q5TH74 334 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 TSHZ3Q63HK5 1081 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 RUSC1-AS1Q66K80 236 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 SEZ6L2Q6UXD5 910 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 CLEC9AQ6UXN8 241 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 DNAJB7Q7Z6W7 309 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 TTC6Q86TZ1 520 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 SLC51BQ86UW2 128 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ADIPOR2Q86V24 386 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 BRSK2Q8IWQ3 736 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ELOA2Q8IYF1 753 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 LGI3Q8N145 548 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 FBXL16Q8N461 479 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 RNF152Q8N8N0 203 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 DTWD2Q8NBA8 298 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 OR4Q3Q8NH05 313 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 OR52J3Q8NH60 311 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 CMTM2Q8TAZ6 248 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 TRPC4APQ8TEL6 797 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ZNF721Q8TF20 911 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ZNF483Q8TF39 744 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 OSBP2Q969R2 916 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 GPRASP2Q96D09 838 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 C4orf36Q96KX1 117 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 PGLYRP2Q96PD5 576 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 TMEM79Q9BSE2 394 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 SLC26A6Q9BXS9 759 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 WDCPQ9H6R7 721 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ZMAT4Q9H898 229 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 SH3GLB2Q9NR46 395 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 TPSG1Q9NRR2 321 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 KCNIP2Q9NS61 270 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 CUEDC1Q9NWM3 386 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 SENP1Q9P0U3 644 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ZFATQ9P243 1243 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 XPR1Q9UBH6 696 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 GULP1Q9UBP9 304 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 ZNF69Q9UC07 566 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 DMGDHQ9UI17 866 aaKnown RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 ZNF230Q9UIE0 474 aaPredicted RBP1.48□□□□□ -2.17
XRN1-214ENST00000498077 PPP1R9AQ9ULJ8 1098 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 FZD1Q9UP38 647 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 SPACA6W5XKT8 324 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 CPED1A4D0V7 1026 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 OR2T8A6NH00 312 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 GOLGA6L10A6NI86 522 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 C11orf94C9JXX5 98 aa1.48□□□□□ -2.17
XRN1-214ENST00000498077 GOLGA6L19H0YKK7 550 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms