RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 FJX1Q86VR8 437 aa4.2□□□□□ -1.74
SMC4-227ENST00000497984 WDR75Q8IWA0 830 aaKnown RBP4.2□□□□□ -1.74
SMC4-227ENST00000497984 RFLNBQ8N5W9 214 aa4.2□□□□□ -1.74
SMC4-227ENST00000497984 DPP10Q8N608 796 aa4.2□□□□□ -1.74
SMC4-227ENST00000497984 BRI3BPQ8WY22 251 aa4.2□□□□□ -1.74
SMC4-227ENST00000497984 SPRY4Q9C004 299 aa4.2□□□□□ -1.74
SMC4-227ENST00000497984 ZDHHC7Q9NXF8 308 aa4.2□□□□□ -1.74
SMC4-227ENST00000497984 PKP3Q9Y446 797 aa4.2□□□□□ -1.74
SMC4-227ENST00000497984 SAC3D1A6NKF1 404 aa4.19□□□□□ -1.74
SMC4-227ENST00000497984 FGF18O76093 207 aa4.19□□□□□ -1.74
SMC4-227ENST00000497984 IGLV2-11P01706 119 aa4.19□□□□□ -1.74
SMC4-227ENST00000497984 UNGP13051 313 aaPredicted RBP4.19□□□□□ -1.74
SMC4-227ENST00000497984 EEF1GP26641 437 aaKnown RBP4.19□□□□□ -1.74
SMC4-227ENST00000497984 KLRK1P26718 216 aa4.19□□□□□ -1.74
SMC4-227ENST00000497984 THPOP40225 353 aa4.19□□□□□ -1.74
SMC4-227ENST00000497984 NUDT6P53370 316 aa4.19□□□□□ -1.74
SMC4-227ENST00000497984 TUBA1BP68363 451 aa4.19□□□□□ -1.74
SMC4-227ENST00000497984 RBM6P78332 1123 aaKnown RBP4.19□□□□□ -1.74
SMC4-227ENST00000497984 RAB30Q15771 203 aa4.19□□□□□ -1.74
SMC4-227ENST00000497984 HLFQ16534 295 aa4.19□□□□□ -1.74
SMC4-227ENST00000497984 PLK5Q496M5 336 aa4.19□□□□□ -1.74
SMC4-227ENST00000497984 SLC30A9Q6PML9 568 aa4.19□□□□□ -1.74
SMC4-227ENST00000497984 DUX5Q96PT3 197 aa4.19□□□□□ -1.74
SMC4-227ENST00000497984 MECRQ9BV79 373 aa4.19□□□□□ -1.74
SMC4-227ENST00000497984 HIPK3Q9H422 1215 aa4.19□□□□□ -1.74
SMC4-227ENST00000497984 CCDC134Q9H6E4 229 aa4.19□□□□□ -1.74
SMC4-227ENST00000497984 OCIAD1Q9NX40 245 aa4.19□□□□□ -1.74
SMC4-227ENST00000497984 ARL15Q9NXU5 204 aa4.19□□□□□ -1.74
SMC4-227ENST00000497984 IL36RNQ9UBH0 155 aa4.19□□□□□ -1.74
SMC4-227ENST00000497984 TBC1D3DA0A087WVF3 549 aa4.18□□□□□ -1.74
SMC4-227ENST00000497984 TBC1D3IA0A087WXS9 549 aa4.18□□□□□ -1.74
SMC4-227ENST00000497984 TBC1D3EA0A087X179 549 aa4.18□□□□□ -1.74
SMC4-227ENST00000497984 TBC1D3KA0A087X1G2 549 aa4.18□□□□□ -1.74
SMC4-227ENST00000497984 TCRBV7S3A2A0A539 114 aa4.18□□□□□ -1.74
SMC4-227ENST00000497984 TBC1D3BA6NDS4 549 aa4.18□□□□□ -1.74
SMC4-227ENST00000497984 TBC1D3FA6NER0 549 aaPredicted RBP4.18□□□□□ -1.74
SMC4-227ENST00000497984 TBC1D3LB9A6J9 549 aa4.18□□□□□ -1.74
SMC4-227ENST00000497984 TBC1D3HP0C7X1 549 aa4.18□□□□□ -1.74
SMC4-227ENST00000497984 IFIT5Q13325 482 aaKnown RBP4.18□□□□□ -1.74
SMC4-227ENST00000497984 FAM209BQ5JX69 171 aa4.18□□□□□ -1.74
SMC4-227ENST00000497984 TBC1D3GQ6DHY5 549 aa4.18□□□□□ -1.74
SMC4-227ENST00000497984 TBC1D3CQ6IPX1 549 aa4.18□□□□□ -1.74
SMC4-227ENST00000497984 TMEM200AQ86VY9 491 aa4.18□□□□□ -1.74
SMC4-227ENST00000497984 TBC1D3Q8IZP1 549 aaPredicted RBP4.18□□□□□ -1.74
SMC4-227ENST00000497984 ZNF566Q969W8 418 aa4.18□□□□□ -1.74
SMC4-227ENST00000497984 NODALQ96S42 347 aa4.18□□□□□ -1.74
SMC4-227ENST00000497984 TM7SF3Q9NS93 570 aa4.18□□□□□ -1.74
SMC4-227ENST00000497984 GEMIN8Q9NWZ8 242 aaKnown RBP4.18□□□□□ -1.74
SMC4-227ENST00000497984 CHPF2Q9P2E5 772 aa4.18□□□□□ -1.74
SMC4-227ENST00000497984 IGLV5-52A0A0A0MRZ9 124 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 KIF28PB7ZC32 967 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 ASAP2O43150 1006 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 BUB3O43684 328 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 KCNJ13O60928 360 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 PARNO95453 639 aaKnown RBP4.17□□□□□ -1.74
SMC4-227ENST00000497984 SP1P08047 785 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 F7P08709 466 aaPredicted RBP4.17□□□□□ -1.74
SMC4-227ENST00000497984 TNFSF4P23510 183 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 DDR1Q08345 913 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 HEPHL1Q6MZM0 1159 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 ANKS1BQ7Z6G8 1248 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 TCP11L2Q8N4U5 519 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 HORMAD2Q8N7B1 307 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 CEP76Q8TAP6 659 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 WDR60Q8WVS4 1066 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 IGSF21Q96ID5 467 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 SARGQ9BW04 601 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 SDF2L1Q9HCN8 221 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 Q9N2J8 555 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 NFU1Q9UMS0 254 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 FAM50BQ9Y247 325 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 RAP2CQ9Y3L5 183 aa4.17□□□□□ -1.74
SMC4-227ENST00000497984 SLC38A8A6NNN8 435 aa4.16□□□□□ -1.74
SMC4-227ENST00000497984 BMPR1BO00238 502 aa4.16□□□□□ -1.74
SMC4-227ENST00000497984 HNRNPDLO14979 420 aaKnown RBP4.16□□□□□ -1.74
SMC4-227ENST00000497984 MYZAPP0CAP1 466 aa4.16□□□□□ -1.74
SMC4-227ENST00000497984 NPPBP16860 134 aa4.16□□□□□ -1.74
SMC4-227ENST00000497984 SLC39A14Q15043 492 aa4.16□□□□□ -1.74
SMC4-227ENST00000497984 RINT1Q6NUQ1 792 aa4.16□□□□□ -1.74
SMC4-227ENST00000497984 C11orf96Q7Z7L8 435 aa4.16□□□□□ -1.74
SMC4-227ENST00000497984 LILRB1Q8NHL6 650 aaPredicted RBP4.16□□□□□ -1.74
SMC4-227ENST00000497984 TMEM163Q8TC26 289 aa4.16□□□□□ -1.74
SMC4-227ENST00000497984 SLC35F5Q8WV83 523 aa4.16□□□□□ -1.74
SMC4-227ENST00000497984 ZNF333Q96JL9 665 aa4.16□□□□□ -1.74
SMC4-227ENST00000497984 NPAS1Q99742 590 aa4.16□□□□□ -1.74
SMC4-227ENST00000497984 TMEM120AQ9BXJ8 343 aa4.16□□□□□ -1.74
SMC4-227ENST00000497984 NAA15Q9BXJ9 866 aaKnown RBP4.16□□□□□ -1.74
SMC4-227ENST00000497984 TCF7L2Q9NQB0 619 aa4.16□□□□□ -1.74
SMC4-227ENST00000497984 IGSF9Q9P2J2 1179 aa4.16□□□□□ -1.74
SMC4-227ENST00000497984 IGHV4-28A0A0C4DH34 117 aa4.15□□□□□ -1.75
SMC4-227ENST00000497984 PRR23AA6NEV1 266 aa4.15□□□□□ -1.75
SMC4-227ENST00000497984 MBD3L5A6NJ08 208 aaPredicted RBP4.15□□□□□ -1.75
SMC4-227ENST00000497984 TRIM27P14373 513 aa4.15□□□□□ -1.75
SMC4-227ENST00000497984 NAGAP17050 411 aa4.15□□□□□ -1.75
SMC4-227ENST00000497984 CYP2J2P51589 502 aa4.15□□□□□ -1.75
SMC4-227ENST00000497984 ALDH18A1P54886 795 aaKnown RBP4.15□□□□□ -1.75
SMC4-227ENST00000497984 MPEG1Q2M385 716 aa4.15□□□□□ -1.75
SMC4-227ENST00000497984 FAM171A1Q5VUB5 890 aa4.15□□□□□ -1.75
SMC4-227ENST00000497984 ZNF771Q7L3S4 317 aaPredicted RBP4.15□□□□□ -1.75
SMC4-227ENST00000497984 ENDOVQ8N8Q3 282 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms