RNA–Protein interactions for RNA: ENST00000497978.1

NUDCD3-211, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-211ENST00000497978 ARHGEF38Q9NXL2 777 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 FTSJ1Q9UET6 329 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 TBC1D30Q9Y2I9 924 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 CABIN1Q9Y6J0 2220 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 PLXNA2O75051 1894 aa12.08□□□□□ -0.48
NUDCD3-211ENST00000497978 MCF2LO15068 1137 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 BNIP3LO60238 219 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 MAGEC1O60732 1142 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 ADCY5O95622 1261 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 LSM8O95777 96 aaKnown RBP12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 ITGAVP06756 1048 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 RHOCP08134 193 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 CDH5P33151 784 aaPredicted RBP12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 DRD3P35462 400 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 GGCXP38435 758 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 GABRB2P47870 512 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 ARRB1P49407 418 aaPredicted RBP12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 IRAK1P51617 712 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 CCDC15Q0P6D6 951 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 SLC25A52Q3SY17 297 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 CT47A1Q5JQC4 288 aaPredicted RBP12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 FAM102AQ5T9C2 384 aaPredicted RBP12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 TAF3Q5VWG9 929 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 NAPEPLDQ6IQ20 393 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 TMPRSS7Q7RTY8 843 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 C14orf80Q86SX3 495 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 SETD3Q86TU7 594 aaPredicted RBP12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 SH2D3CQ8N5H7 860 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 PIP4K2CQ8TBX8 421 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 PGAP3Q96FM1 320 aaPredicted RBP12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 C2orf49Q9BVC5 232 aaPredicted RBP12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 CCDC86Q9H6F5 360 aaKnown RBP12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 EBF2Q9HAK2 575 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 TOR4AQ9NXH8 423 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 PPM1HQ9ULR3 514 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 PCDHGA4Q9Y5G9 962 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 OR51B4Q9Y5P0 310 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 FHOD1Q9Y613 1164 aa12.07□□□□□ -0.48
NUDCD3-211ENST00000497978 A0A1W2PR77 199 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 TLR4O00206 839 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 LATO43561 262 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 PLRG1O43660 514 aaKnown RBP12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 RTN2O75298 545 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 DKK1O94907 266 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 WNT1P04628 370 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 TPM2P07951 284 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 UCHL3P15374 230 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 EEF1GP26641 437 aaKnown RBP12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 KCNMA1Q12791 1236 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 SETMARQ53H47 684 aaPredicted RBP12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 CCDC157Q569K6 752 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 TCP11X2Q5H9J9 407 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 C6orf118Q5T5N4 469 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 Q6ZVU0 165 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 PROSER1Q86XN7 944 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 XYLT1Q86Y38 959 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 OXR1Q8N573 874 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 MFSD2AQ8NA29 543 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 ATP11CQ8NB49 1132 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 OR52K2Q8NGK3 314 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 NT5C3BQ969T7 300 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 FAM131CQ96AQ9 280 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 C1orf74Q96LT6 269 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 TBCBQ99426 244 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 STK33Q9BYT3 514 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 SARDHQ9UL12 918 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 DMTF1Q9Y222 760 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 HS3ST2Q9Y278 367 aa12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 TP53BP1Q12888 1972 aaPredicted RBP12.06□□□□□ -0.48
NUDCD3-211ENST00000497978 PTPRBP23467 1997 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 DRGXA6NNA5 263 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 C10orf142B7Z368 130 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 GOLGA8SH3BPF8 625 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 PLK4O00444 970 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 CNTN5O94779 1100 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 LDOC1O95751 146 aaPredicted RBP12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 SRCP12931 536 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 TFE3P19532 575 aaPredicted RBP12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 OR1E1P30953 314 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 MAT2AP31153 395 aaKnown RBP12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 RECQLP46063 649 aaPredicted RBP12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 METAP1P53582 386 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 NXPH1P58417 271 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 PPP2CBP62714 309 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 PPP2CAP67775 309 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 CNTN1Q12860 1018 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 OVGP1Q12889 678 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 STAT4Q14765 748 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 POM121L1PQ3SYA9 428 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 ALFQ53S48 1182 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 PRAMEF14Q5SWL7 426 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 OTUD1Q5VV17 481 aaPredicted RBP12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 DPY19L2P1Q6NXN4 242 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 IQCHQ86VS3 1027 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 TRIM69Q86WT6 500 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 ZNF677Q86XU0 584 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 GATAD2AQ86YP4 633 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 DCAF4L2Q8NA75 395 aa12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 NAA15Q9BXJ9 866 aaKnown RBP12.05□□□□□ -0.48
NUDCD3-211ENST00000497978 ERVMER34-1Q9H9K5 563 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms