RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 OR52K2Q8NGK3 314 aa11.75□□□□□ -0.53
HLA-B-254ENST00000497377 SIPA1Q96FS4 1042 aa11.75□□□□□ -0.53
HLA-B-254ENST00000497377 PANX2Q96RD6 677 aa11.75□□□□□ -0.53
HLA-B-254ENST00000497377 MKRN2Q9H000 416 aaKnown RBP11.75□□□□□ -0.53
HLA-B-254ENST00000497377 MAGEH1Q9H213 219 aa11.75□□□□□ -0.53
HLA-B-254ENST00000497377 PRSS16Q9NQE7 514 aa11.75□□□□□ -0.53
HLA-B-254ENST00000497377 USP36Q9P275 1121 aaKnown RBP11.75□□□□□ -0.53
HLA-B-254ENST00000497377 NCDNQ9UBB6 729 aa11.75□□□□□ -0.53
HLA-B-254ENST00000497377 INTUQ9ULD6 942 aa11.75□□□□□ -0.53
HLA-B-254ENST00000497377 USP18Q9UMW8 372 aa11.75□□□□□ -0.53
HLA-B-254ENST00000497377 SCML1Q9UN30 329 aa11.75□□□□□ -0.53
HLA-B-254ENST00000497377 AP4E1Q9UPM8 1137 aa11.75□□□□□ -0.53
HLA-B-254ENST00000497377 NEU3Q9UQ49 428 aa11.75□□□□□ -0.53
HLA-B-254ENST00000497377 HS3ST2Q9Y278 367 aa11.75□□□□□ -0.53
HLA-B-254ENST00000497377 CHD5Q8TDI0 1954 aa11.75□□□□□ -0.53
HLA-B-254ENST00000497377 OTOGLQ3ZCN5 2332 aa11.75□□□□□ -0.53
HLA-B-254ENST00000497377 FAM186AA6NE01 2351 aa11.75□□□□□ -0.53
HLA-B-254ENST00000497377 RIF1Q5UIP0 2472 aaKnown RBP11.75□□□□□ -0.53
HLA-B-254ENST00000497377 WASH4PA8MWX3 477 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 CREB3O43889 395 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 RNASEH1O60930 286 aaKnown RBP11.74□□□□□ -0.53
HLA-B-254ENST00000497377 LRP3O75074 770 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 IGLV3-19P01714 112 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 ACADMP11310 421 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 HLA-EP13747 358 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 CDC25BP30305 580 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 OXTRP30559 389 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 CTSOP43234 321 aaPredicted RBP11.74□□□□□ -0.53
HLA-B-254ENST00000497377 COPAP53621 1224 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 GEMIN4P57678 1058 aaKnown RBP11.74□□□□□ -0.53
HLA-B-254ENST00000497377 YBEYP58557 167 aaPredicted RBP11.74□□□□□ -0.53
HLA-B-254ENST00000497377 TPI1P60174 286 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 SFSWAPQ12872 951 aaKnown RBP11.74□□□□□ -0.53
HLA-B-254ENST00000497377 MAP7D1Q3KQU3 841 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 PLK5Q496M5 336 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 BOLA3Q53S33 107 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 ZNF776Q68DI1 518 aaPredicted RBP11.74□□□□□ -0.53
HLA-B-254ENST00000497377 RETSATQ6NUM9 610 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 LPCAT2Q7L5N7 544 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 KBTBD6Q86V97 674 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 PYROXD2Q8N2H3 581 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 FAM160A2Q8N612 972 aaPredicted RBP11.74□□□□□ -0.53
HLA-B-254ENST00000497377 ARFGAP1Q8N6T3 406 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 ZNF564Q8TBZ8 553 aaPredicted RBP11.74□□□□□ -0.53
HLA-B-254ENST00000497377 TEKT4Q8WW24 435 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 ARHGEF26Q96DR7 871 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 RPL10LQ96L21 214 aaKnown RBP11.74□□□□□ -0.53
HLA-B-254ENST00000497377 PSMB7Q99436 277 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 SNRNP25Q9BV90 132 aaKnown RBP11.74□□□□□ -0.53
HLA-B-254ENST00000497377 DUSP15Q9H1R2 295 aaPredicted RBP11.74□□□□□ -0.53
HLA-B-254ENST00000497377 RSPH9Q9H1X1 276 aaPredicted RBP11.74□□□□□ -0.53
HLA-B-254ENST00000497377 LUC7LQ9NQ29 371 aaKnown RBP11.74□□□□□ -0.53
HLA-B-254ENST00000497377 NPDC1Q9NQX5 325 aaPredicted RBP11.74□□□□□ -0.53
HLA-B-254ENST00000497377 ITM2CQ9NQX7 267 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 CTTNBP2NLQ9P2B4 639 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 IMPACTQ9P2X3 320 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 PCSK1NQ9UHG2 260 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 HPCAL4Q9UM19 191 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 PCDHGA5Q9Y5G8 931 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 MYO15AQ9UKN7 3530 aa11.74□□□□□ -0.53
HLA-B-254ENST00000497377 WDR87Q6ZQQ6 2873 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 IGHV1OR15-9A0A0B4J2B8 117 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 A0A0D9SEW6 157 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 TTC34A8MYJ7 566 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 FOXD2O60548 495 aaPredicted RBP11.73□□□□□ -0.53
HLA-B-254ENST00000497377 RAMP2O60895 175 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 CYLC1P35663 651 aaPredicted RBP11.73□□□□□ -0.53
HLA-B-254ENST00000497377 DPP6P42658 865 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 HCAR3P49019 387 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 ELAVL3Q14576 367 aaKnown RBP11.73□□□□□ -0.53
HLA-B-254ENST00000497377 HADHQ16836 314 aaKnown RBP11.73□□□□□ -0.53
HLA-B-254ENST00000497377 TTC31Q49AM3 519 aaPredicted RBP11.73□□□□□ -0.53
HLA-B-254ENST00000497377 C9orf64Q5T6V5 341 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 PMS2CLQ68D20 193 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 THADAQ6YHU6 1953 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 CYP4V2Q6ZWL3 525 aaPredicted RBP11.73□□□□□ -0.53
HLA-B-254ENST00000497377 USP34Q70CQ2 3546 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 DSG4Q86SJ6 1040 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 RHOT2Q8IXI1 618 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 SH2D3CQ8N5H7 860 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 ZNF366Q8N895 744 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 RLN3Q8WXF3 142 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 CCDC114Q96M63 670 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 PEBP4Q96S96 227 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 HINFPQ9BQA5 517 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 ACE2Q9BYF1 805 aaPredicted RBP11.73□□□□□ -0.53
HLA-B-254ENST00000497377 DHX35Q9H5Z1 703 aaKnown RBP11.73□□□□□ -0.53
HLA-B-254ENST00000497377 ATP13A1Q9HD20 1204 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 SPTLC3Q9NUV7 552 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 VPS51Q9UID3 782 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 SLCO3A1Q9UIG8 710 aa11.73□□□□□ -0.53
HLA-B-254ENST00000497377 NYNRINQ9P2P1 1898 aaKnown RBP11.72□□□□□ -0.53
HLA-B-254ENST00000497377 ZSCAN5CA6NGD5 496 aaPredicted RBP11.72□□□□□ -0.53
HLA-B-254ENST00000497377 GOLGA6L6A8MZA4 724 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 CBX4O00257 560 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 EEF2KO00418 725 aaKnown RBP11.72□□□□□ -0.53
HLA-B-254ENST00000497377 DCLK1O15075 740 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 ALOX15BO15296 676 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 SNAP91O60641 907 aa11.72□□□□□ -0.53
HLA-B-254ENST00000497377 SIN3BO75182 1162 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms