RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 KBTBD6Q86V97 674 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 UBXN4Q92575 508 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 CENPIQ92674 756 aaPredicted RBP8.81□□□□□ -1
U2AF1-212ENST00000496462 CELF6Q96J87 481 aaKnown RBP8.81□□□□□ -1
U2AF1-212ENST00000496462 LRIG1Q96JA1 1093 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 CSPG4P5Q96PW8 444 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 OSBPL1AQ9BXW6 950 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 OSBPL6Q9BZF3 934 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 CD320Q9NPF0 282 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 HEBP1Q9NRV9 189 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 TXNDC16Q9P2K2 825 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 NME7Q9Y5B8 376 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 CACNG3O60359 315 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 ZNF217O75362 1048 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 CSKP41240 450 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 ELP6Q0PNE2 266 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 NAPEPLDQ6IQ20 393 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 TMEM25Q86YD3 366 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 SLC13A5Q86YT5 568 aaPredicted RBP8.81□□□□□ -1
U2AF1-212ENST00000496462 CCDC185Q8N715 623 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 GSDMBQ8TAX9 411 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 HEPHQ9BQS7 1158 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 LACRTQ9GZZ8 138 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 LINC00597Q9H2U6 94 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 EVA1BQ9NVM1 165 aa8.81□□□□□ -1
U2AF1-212ENST00000496462 MUC6Q6W4X9 2439 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 KCNN4O15554 427 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 LZTS3O60299 673 aaPredicted RBP8.8□□□□□ -1
U2AF1-212ENST00000496462 IL1BP01584 269 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 PAMP19021 973 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 ATXN3P54252 364 aaPredicted RBP8.8□□□□□ -1
U2AF1-212ENST00000496462 ZNF33AQ06730 810 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 ZNF211Q13398 564 aaPredicted RBP8.8□□□□□ -1
U2AF1-212ENST00000496462 SCARA3Q6AZY7 606 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 TRIM68Q6AZZ1 485 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 BBS12Q6ZW61 710 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 ADGRG2Q8IZP9 1017 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 CNPY4Q8N129 248 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 KDM1BQ8NB78 822 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 ST13P5Q8NFI4 369 aaPredicted RBP8.8□□□□□ -1
U2AF1-212ENST00000496462 SIPA1Q96FS4 1042 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 KCTD15Q96SI1 283 aaPredicted RBP8.8□□□□□ -1
U2AF1-212ENST00000496462 CCDC77Q9BR77 488 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 LRRC3Q9BY71 257 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 CEP44Q9C0F1 390 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 EPHX3Q9H6B9 360 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 VNN2O95498 520 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 KLF8O95600 359 aaPredicted RBP8.8□□□□□ -1
U2AF1-212ENST00000496462 ADH1BP00325 375 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 CCNCP24863 283 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 SCNN1BP51168 640 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 TMEM31Q5JXX7 168 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 ARMC12Q5T9G4 340 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 NT5DC3Q86UY8 548 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 ZSWIM3Q96MP5 696 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 NT5MQ9NPB1 228 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 GTSE1Q9NYZ3 720 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 BFARQ9NZS9 450 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 MUTYHQ9UIF7 546 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 IKBKGQ9Y6K9 419 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 GOLGA6L7A0A1B0GV03 622 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 MEI4A8MW99 385 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 ANHXE9PGG2 379 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 CES2O00748 559 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 OPHN1O60890 802 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 JCHAINP01591 159 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 PRLRP16471 622 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 GALK1P51570 392 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 ZBTB16Q05516 673 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 DNAJC21Q5F1R6 531 aaKnown RBP8.8□□□□□ -1
U2AF1-212ENST00000496462 CASC4Q6P4E1 433 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 MFSD7Q6UXD7 560 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 KLHL7Q8IXQ5 586 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 USP33Q8TEY7 942 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 FGF14Q92915 247 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 TTC25Q96NG3 672 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 OSBPL9Q96SU4 736 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 RUFY1Q96T51 708 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 HINFPQ9BQA5 517 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 FRMD8Q9BZ67 464 aaPredicted RBP8.8□□□□□ -1
U2AF1-212ENST00000496462 CDC23Q9UJX2 597 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 PDE2AO00408 941 aaPredicted RBP8.8□□□□□ -1
U2AF1-212ENST00000496462 PCDH8O95206 1070 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 APBB3O95704 486 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 BASP1P80723 227 aaKnown RBP8.8□□□□□ -1
U2AF1-212ENST00000496462 PDE1BQ01064 536 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 KCNC3Q14003 757 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 LBRQ14739 615 aaKnown RBP8.8□□□□□ -1
U2AF1-212ENST00000496462 MEI1Q5TIA1 1274 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 SLC36A4Q6YBV0 504 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 USP45Q70EL2 814 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 RABEPKQ7Z6M1 372 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 PRPF39Q86UA1 669 aaKnown RBP8.8□□□□□ -1
U2AF1-212ENST00000496462 RGL4Q8IZJ4 473 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 FAF2Q96CS3 445 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 SLC22A12Q96S37 553 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 SYT11Q9BT88 431 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 ACBD3Q9H3P7 528 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 SNX12Q9UMY4 172 aa8.8□□□□□ -1
U2AF1-212ENST00000496462 SCN1AP35498 2009 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms