RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 KIAA2013Q8IYS2 634 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 FRMD1Q8N878 549 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 ZNF366Q8N895 744 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 DCAF4L2Q8NA75 395 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 ERLEC1Q96DZ1 483 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 ANP32EQ9BTT0 268 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 THAP2Q9H0W7 228 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 RBSNQ9H1K0 784 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 SLC6A17Q9H1V8 727 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 ARRDC1-AS1Q9H2J1 176 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 VPS45Q9NRW7 570 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 SEMA4GQ9NTN9 838 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 ABHD10Q9NUJ1 306 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 TMEM248Q9NWD8 314 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 DONSONQ9NYP3 566 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 WSB2Q9NYS7 404 aaPredicted RBP12.68□□□□□ -0.38
MRPL55-233ENST00000495899 MYO1AQ9UBC5 1043 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 NENFQ9UMX5 172 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 CYP8B1Q9UNU6 501 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 HS3ST2Q9Y278 367 aa12.68□□□□□ -0.38
MRPL55-233ENST00000495899 GPR179Q6PRD1 2367 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 RIF1Q5UIP0 2472 aaKnown RBP12.67□□□□□ -0.38
MRPL55-233ENST00000495899 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 A0A0D9SEW6 157 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 AKR1B15C9JRZ8 316 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-233ENST00000495899 PRPSAP2O60256 369 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 SIN3BO75182 1162 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 NDUFS2O75306 463 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 DNTTP04053 509 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 ZNF806P0C7X5 589 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 CD46P15529 392 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 HOXD12P35452 270 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 PCK1P35558 622 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 ZNF135P52742 658 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-233ENST00000495899 RPS14P62263 151 aaKnown RBP12.67□□□□□ -0.38
MRPL55-233ENST00000495899 RPL6Q02878 288 aaKnown RBP12.67□□□□□ -0.38
MRPL55-233ENST00000495899 GNA12Q03113 381 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 LMNB2Q03252 620 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 ZNF252P-AS1Q0IIN9 211 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 SEMA3BQ13214 749 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 PIGHQ14442 188 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-233ENST00000495899 ELAVL3Q14576 367 aaKnown RBP12.67□□□□□ -0.38
MRPL55-233ENST00000495899 ASTE1Q2TB18 679 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-233ENST00000495899 ERMARDQ5T6L9 678 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 ZNF776Q68DI1 518 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-233ENST00000495899 RETSATQ6NUM9 610 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 USP30Q70CQ3 517 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 TMEFF1Q8IYR6 380 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 SH2D3CQ8N5H7 860 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 ARFGAP1Q8N6T3 406 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 CADM4Q8NFZ8 388 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 FRS2Q8WU20 508 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 PTPRN2Q92932 1015 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 FOXJ1Q92949 421 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 ZNF419Q96HQ0 510 aaPredicted RBP12.67□□□□□ -0.38
MRPL55-233ENST00000495899 PSMB7Q99436 277 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 MAGEB5Q9BZ81 275 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 PCED1AQ9H1Q7 454 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 MAGEH1Q9H213 219 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 CATSPERBQ9H7T0 1116 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 NEU3Q9UQ49 428 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 OTOGLQ3ZCN5 2332 aa12.67□□□□□ -0.38
MRPL55-233ENST00000495899 WASH4PA8MWX3 477 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 PRR5-ARHGAP8B1AHC4 643 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 ALOX15BO15296 676 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 FGF10O15520 208 aaPredicted RBP12.66□□□□□ -0.38
MRPL55-233ENST00000495899 AKR1B10O60218 316 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 SDHBP21912 280 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 EPHB2P29323 1055 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 MPLP40238 635 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 DHPSP49366 369 aaPredicted RBP12.66□□□□□ -0.38
MRPL55-233ENST00000495899 STK19P49842 368 aaPredicted RBP12.66□□□□□ -0.38
MRPL55-233ENST00000495899 GALCP54803 685 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 ADKP55263 362 aaKnown RBP12.66□□□□□ -0.38
MRPL55-233ENST00000495899 ARHGAP8P85298 464 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 CREB5Q02930 508 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 GFPT1Q06210 699 aaPredicted RBP12.66□□□□□ -0.38
MRPL55-233ENST00000495899 DLG2Q15700 870 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 TTC31Q49AM3 519 aaPredicted RBP12.66□□□□□ -0.38
MRPL55-233ENST00000495899 ACCSLQ4AC99 568 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 BOLA3Q53S33 107 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 LYSMD4Q5XG99 296 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 CYP2U1Q7Z449 544 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 DSG4Q86SJ6 1040 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 SYT12Q8IV01 421 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 PYROXD2Q8N2H3 581 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 NIPA2Q8N8Q9 360 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 TOE1Q96GM8 510 aaKnown RBP12.66□□□□□ -0.38
MRPL55-233ENST00000495899 MRFAP1L1Q96HT8 127 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 CCDC42Q96M95 316 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 FAM129BQ96TA1 746 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 SPON2Q9BUD6 331 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 ACE2Q9BYF1 805 aaPredicted RBP12.66□□□□□ -0.38
MRPL55-233ENST00000495899 TRIM7Q9C029 511 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 DEF6Q9H4E7 631 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 MTG2Q9H4K7 406 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 PARD6AQ9NPB6 346 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 IP6K2Q9UHH9 426 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 LCMT1Q9UIC8 334 aa12.66□□□□□ -0.38
MRPL55-233ENST00000495899 VPS51Q9UID3 782 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms