RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 FBXO36Q8NEA4 188 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 AZIN2Q96A70 460 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 TLCD1Q96CP7 247 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 MYRFLQ96LU7 910 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 CYTH2Q99418 400 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 LGMNQ99538 433 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 ASAH2Q9NR71 780 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 DNAJC17Q9NVM6 304 aaKnown RBP10.5□□□□□ -0.73
HDAC3-214ENST00000495485 USP15Q9Y4E8 981 aaPredicted RBP10.5□□□□□ -0.73
HDAC3-214ENST00000495485 YIPF1Q9Y548 306 aa10.5□□□□□ -0.73
HDAC3-214ENST00000495485 TCF20Q9UGU0 1960 aaKnown RBP10.5□□□□□ -0.73
HDAC3-214ENST00000495485 MUC3AQ02505 3323 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 MAGEB16A2A368 324 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 SMIM23A6NLE4 172 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 F5H5T6 163 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 H3BQ06 376 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-214ENST00000495485 DFFAO00273 331 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 MSI1O43347 362 aaKnown RBP10.49□□□□□ -0.73
HDAC3-214ENST00000495485 CPP00450 1065 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 SHBGP04278 402 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 DDX6P26196 483 aaKnown RBP eCLIP10.49□□□□□ -0.73
HDAC3-214ENST00000495485 CDC25CP30307 473 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 HPDP32754 393 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-214ENST00000495485 MSH2P43246 934 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 MAPKAPK2P49137 400 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 RENBPP51606 427 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 YBEYP58557 167 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-214ENST00000495485 USP46P62068 366 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 DLX2Q07687 328 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-214ENST00000495485 AUHQ13825 339 aaKnown RBP10.49□□□□□ -0.73
HDAC3-214ENST00000495485 TMCO4Q5TGY1 634 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 MANEALQ5VSG8 457 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 ARMC3Q5W041 872 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 NAPEPLDQ6IQ20 393 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 LRRC8BQ6P9F7 803 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 TMC5Q6UXY8 1006 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 MIB1Q86YT6 1006 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 ADHFE1Q8IWW8 467 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 BBS5Q8N3I7 341 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 TTC9BQ8N6N2 239 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 UHMK1Q8TAS1 419 aaKnown RBP10.49□□□□□ -0.73
HDAC3-214ENST00000495485 FATE1Q969F0 183 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 ZNF707Q96C28 371 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-214ENST00000495485 GCNAQ96QF7 691 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 MAGEB5Q9BZ81 275 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 LRRC4CQ9HCJ2 640 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 TMPRSS4Q9NRS4 437 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 GDE1Q9NZC3 331 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 SAMD15Q9P1V8 674 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 PSMC3IPQ9P2W1 217 aaPredicted RBP10.49□□□□□ -0.73
HDAC3-214ENST00000495485 RSPH14Q9UHP6 348 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 LGALS13Q9UHV8 139 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 HS3ST4Q9Y661 456 aa10.49□□□□□ -0.73
HDAC3-214ENST00000495485 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.49□□□□□ -0.73
HDAC3-214ENST00000495485 ANAPC1Q9H1A4 1944 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 IQANK1A0A1B0GTG1 560 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 TYW5A2RUC4 315 aaKnown RBP10.48□□□□□ -0.73
HDAC3-214ENST00000495485 SDR42E2A6NKP2 422 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 MATN3O15232 486 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 TMEM63AO94886 807 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 MAP3K6O95382 1288 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 SEC24AO95486 1093 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 LATS1O95835 1130 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 IGLV3-27P01718 113 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 BMP1P13497 986 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 ATF6P18850 670 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 WEE1P30291 646 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 ETFBP38117 255 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 ELK3P41970 407 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 NPY2RP49146 381 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 GEMP55040 296 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 TWF1Q12792 350 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 LONRF1Q17RB8 773 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 MS4A13Q5J8X5 152 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 FNBP1LQ5T0N5 605 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 TTC39BQ5VTQ0 682 aaPredicted RBP10.48□□□□□ -0.73
HDAC3-214ENST00000495485 ANKRD22Q5VYY1 191 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 CYS1Q717R9 158 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 ANKMY2Q8IV38 441 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 ZNF567Q8N184 647 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 UMODL1-AS1Q8N2C9 162 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 TAB3Q8N5C8 712 aaPredicted RBP10.48□□□□□ -0.73
HDAC3-214ENST00000495485 KIAA1958Q8N8K9 716 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 GABPB2Q8TAK5 448 aaPredicted RBP10.48□□□□□ -0.73
HDAC3-214ENST00000495485 GPR152Q8TDT2 470 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 EPS8L3Q8TE67 593 aaKnown RBP10.48□□□□□ -0.73
HDAC3-214ENST00000495485 CDKL2Q92772 493 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 ARHGEF2Q92974 986 aaKnown RBP10.48□□□□□ -0.73
HDAC3-214ENST00000495485 E2F7Q96AV8 911 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 CENPTQ96BT3 561 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 GBA3Q9H227 469 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 ACSS3Q9H6R3 686 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 LRRC40Q9H9A6 602 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 TMEM248Q9NWD8 314 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 OSER1Q9NX31 292 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 BFARQ9NZS9 450 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 ZC3H7BQ9UGR2 993 aaKnown RBP10.48□□□□□ -0.73
HDAC3-214ENST00000495485 NUDT5Q9UKK9 219 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 TEX264Q9Y6I9 313 aa10.48□□□□□ -0.73
HDAC3-214ENST00000495485 NUP210Q8TEM1 1887 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms