RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 ZSCAN5CA6NGD5 496 aaPredicted RBP12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 ARHGAP42A6NI28 874 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 TTC34A8MYJ7 566 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 KRT86O43790 486 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 SNAP91O60641 907 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 CCDC175P0C221 793 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 ACADMP11310 421 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 TDGF1P13385 188 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 CNR2P34972 360 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 SERPINB6P35237 376 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 DMWDQ09019 674 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 CAMK2GQ13555 558 aaPredicted RBP12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 BYSLQ13895 437 aaKnown RBP12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 HNRNPA1L2Q32P51 320 aaKnown RBP12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 ATP13A4Q4VNC1 1196 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 USP39Q53GS9 565 aaKnown RBP12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 LRRC38Q5VT99 294 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 C11orf63Q6NUN7 778 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 KIAA1211LQ6NV74 962 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 KIAA1324Q6UXG2 1013 aaKnown RBP12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 CPNE8Q86YQ8 564 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 UMODL1-AS1Q8N2C9 162 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 SH2D3CQ8N5H7 860 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 MDGA1Q8NFP4 955 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 TPCN2Q8NHX9 752 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 PRCCQ92733 491 aaPredicted RBP12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 SPACA7Q96KW9 195 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 CCDC114Q96M63 670 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 CSPG4P5Q96PW8 444 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 PSMB7Q99436 277 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 MAK16Q9BXY0 300 aaKnown RBP12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 ACE2Q9BYF1 805 aaPredicted RBP12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 TPSD1Q9BZJ3 242 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 LACRTQ9GZZ8 138 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 PRDM16Q9HAZ2 1276 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 KLHL11Q9NVR0 708 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 RAPGEFL1Q9UHV5 662 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 SLCO3A1Q9UIG8 710 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 HS3ST2Q9Y278 367 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 FARP1Q9Y4F1 1045 aaPredicted RBP12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 HYOU1Q9Y4L1 999 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 DUSP10Q9Y6W6 482 aa12.36□□□□□ -0.43
CSNK1E-213ENST00000495232 CXorf51AA0A1B0GTR3 108 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 LRRD1A4D1F6 860 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 RASA4BC9J798 803 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 DFFAO00273 331 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 RASA4O43374 803 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 PSTPIP1O43586 416 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 KDELR3O43731 214 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 ATP9BO43861 1147 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 BNIP3LO60238 219 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 GABRG2P18507 467 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 AMPD1P23109 780 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 GLDCP23378 1020 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 RECQLP46063 649 aaPredicted RBP12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 VASPP50552 380 aaPredicted RBP12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 CLCN6P51797 869 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 DPYSQ14117 519 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 DPYSL3Q14195 570 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 DLG2Q15700 870 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 LINGO4Q6UY18 593 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 CEP68Q76N32 757 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 METTL3Q86U44 580 aaKnown RBP12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 RASSF3Q86WH2 238 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 TMPRSS6Q8IU80 811 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 SYCE1Q8N0S2 351 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 ZBTB44Q8NCP5 570 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 OR2T3Q8NH03 318 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 KIAA1524Q8TCG1 905 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 SIPA1Q96FS4 1042 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 HMCESQ96FZ2 354 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 MYO19Q96H55 970 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 CELF6Q96J87 481 aaKnown RBP12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 ZNF670Q9BS34 389 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 PRSS16Q9NQE7 514 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 ADGRG1Q9Y653 693 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 R4GN57 208 aa12.35□□□□□ -0.43
CSNK1E-213ENST00000495232 MUC22E2RYF6 1773 aaPredicted RBP12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 VPS13AQ96RL7 3174 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 SIN3BO75182 1162 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 ZNF217O75362 1048 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 RPP40O75818 363 aaKnown RBP12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 MT-CO1P00395 513 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 DNTTP04053 509 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 KRT1P04264 644 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 CD48P09326 243 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 SRCP12931 536 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 NDUFV2P19404 249 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 KDELR1P24390 212 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 SERPINH1P50454 418 aaKnown RBP12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 DNA2P51530 1060 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 ARF5P84085 180 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 CCZ1BP86790 482 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 CCZ1P86791 482 aaPredicted RBP12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 SFSWAPQ12872 951 aaKnown RBP12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 MMRN1Q13201 1228 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 SERINC3Q13530 473 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 ANKRD20A8PQ5CZ79 823 aa12.34□□□□□ -0.43
CSNK1E-213ENST00000495232 DSG4Q86SJ6 1040 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms