RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 ZNF513Q8N8E2 541 aaPredicted RBP11.29□□□□□ -0.6
KDM1A-205ENST00000494920 KCTD6Q8NC69 237 aa11.29□□□□□ -0.6
KDM1A-205ENST00000494920 TRIM58Q8NG06 486 aa11.29□□□□□ -0.6
KDM1A-205ENST00000494920 RPLP0P6Q8NHW5 317 aa11.29□□□□□ -0.6
KDM1A-205ENST00000494920 CYB5D2Q8WUJ1 264 aa11.29□□□□□ -0.6
KDM1A-205ENST00000494920 ACDQ96AP0 544 aa11.29□□□□□ -0.6
KDM1A-205ENST00000494920 VOPP1Q96AW1 172 aa11.29□□□□□ -0.6
KDM1A-205ENST00000494920 RNF25Q96BH1 459 aaPredicted RBP11.29□□□□□ -0.6
KDM1A-205ENST00000494920 CELF6Q96J87 481 aaKnown RBP11.29□□□□□ -0.6
KDM1A-205ENST00000494920 CALN1Q9BXU9 219 aa11.29□□□□□ -0.6
KDM1A-205ENST00000494920 SLC39A8Q9C0K1 460 aa11.29□□□□□ -0.6
KDM1A-205ENST00000494920 MFSD1Q9H3U5 465 aa11.29□□□□□ -0.6
KDM1A-205ENST00000494920 PRDM16Q9HAZ2 1276 aa11.29□□□□□ -0.6
KDM1A-205ENST00000494920 PDFQ9HBH1 243 aa11.29□□□□□ -0.6
KDM1A-205ENST00000494920 ZDHHC4Q9NPG8 344 aa11.29□□□□□ -0.6
KDM1A-205ENST00000494920 PRMT8Q9NR22 394 aaPredicted RBP11.29□□□□□ -0.6
KDM1A-205ENST00000494920 POLR3BQ9NW08 1133 aaPredicted RBP11.29□□□□□ -0.6
KDM1A-205ENST00000494920 TRMT1Q9NXH9 659 aaKnown RBP11.29□□□□□ -0.6
KDM1A-205ENST00000494920 DONSONQ9NYP3 566 aa11.29□□□□□ -0.6
KDM1A-205ENST00000494920 VPS28Q9UK41 221 aa11.29□□□□□ -0.6
KDM1A-205ENST00000494920 MMP17Q9ULZ9 603 aa11.29□□□□□ -0.6
KDM1A-205ENST00000494920 ERVW-1Q9UQF0 538 aa11.29□□□□□ -0.6
KDM1A-205ENST00000494920 SPAG17Q6Q759 2223 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 A0A1W2PQF6 199 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 DLL1O00548 723 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 NCAM2O15394 837 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 ATP9BO43861 1147 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 ZNF821O75541 412 aaPredicted RBP11.28□□□□□ -0.6
KDM1A-205ENST00000494920 ZRANB2O95218 330 aaKnown RBP eCLIP11.28□□□□□ -0.6
KDM1A-205ENST00000494920 PEX11BO96011 259 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 MT-CO1P00395 513 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 SRPRAP08240 638 aaKnown RBP11.28□□□□□ -0.6
KDM1A-205ENST00000494920 PYGMP11217 842 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 TNNT1P13805 278 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 POLR2EP19388 210 aaKnown RBP11.28□□□□□ -0.6
KDM1A-205ENST00000494920 PRKCHP24723 683 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 TIE1P35590 1138 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 ETFBP38117 255 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 NUMBP49757 651 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 STK19P49842 368 aaPredicted RBP11.28□□□□□ -0.6
KDM1A-205ENST00000494920 SEC13P55735 322 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 RWDD2BP57060 319 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 COPS2P61201 443 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 ECT2LQ008S8 904 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 SULT2A1Q06520 285 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 GALNT2Q10471 571 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 SLC10A2Q12908 348 aaPredicted RBP11.28□□□□□ -0.6
KDM1A-205ENST00000494920 NUMA1Q14980 2115 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 POLD3Q15054 466 aaPredicted RBP11.28□□□□□ -0.6
KDM1A-205ENST00000494920 C2orf27AQ580R0 203 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 AADACL2Q6P093 401 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 ARHGAP36Q6ZRI8 547 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 SYT13Q7L8C5 426 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 CCDC117Q8IWD4 279 aaPredicted RBP11.28□□□□□ -0.6
KDM1A-205ENST00000494920 MAML2Q8IZL2 1156 aaPredicted RBP11.28□□□□□ -0.6
KDM1A-205ENST00000494920 SPEM1Q8N4L4 309 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 ALLCQ8N6M5 410 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 NETO2Q8NC67 525 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 CCDC26Q8TAB7 109 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 FRS2Q8WU20 508 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 RBM41Q96IZ5 413 aaKnown RBP11.28□□□□□ -0.6
KDM1A-205ENST00000494920 OLFM3Q96PB7 478 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 C2orf49Q9BVC5 232 aaPredicted RBP11.28□□□□□ -0.6
KDM1A-205ENST00000494920 CIPCQ9C0C6 399 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 MUC3BQ9H195 1237 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 ATP13A1Q9HD20 1204 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 CACNA2D2Q9NY47 1150 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 DTLQ9NZJ0 730 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 SLCO3A1Q9UIG8 710 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 EFR3BQ9Y2G0 817 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 LAMA1P25391 3075 aa11.28□□□□□ -0.6
KDM1A-205ENST00000494920 GOLGA6L9A6NEM1 432 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 WASH3PC4AMC7 463 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 K7ESF4 209 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 KDELR3O43731 214 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 PRAMEF11O60813 436 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 KLF8O95600 359 aaPredicted RBP11.27□□□□□ -0.61
KDM1A-205ENST00000494920 ATP5BP06576 529 aaKnown RBP11.27□□□□□ -0.61
KDM1A-205ENST00000494920 SRCP12931 536 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 KRT10P13645 584 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 COL9A1P20849 921 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 AVPR2P30518 371 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 NTSR1P30989 418 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 SERPINB6P35237 376 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 SERPINH1P50454 418 aaKnown RBP11.27□□□□□ -0.61
KDM1A-205ENST00000494920 KLF1Q13351 362 aaPredicted RBP11.27□□□□□ -0.61
KDM1A-205ENST00000494920 TFDP3Q5H9I0 405 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 TMEM31Q5JXX7 168 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 TMCO3Q6UWJ1 677 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 TMEM92Q6UXU6 159 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 NUDT18Q6ZVK8 323 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 BBS12Q6ZW61 710 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 SLC35F6Q8N357 371 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 C17orf53Q8N3J3 647 aaPredicted RBP11.27□□□□□ -0.61
KDM1A-205ENST00000494920 SH2D3CQ8N5H7 860 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 TXNDC5Q8NBS9 432 aaKnown RBP11.27□□□□□ -0.61
KDM1A-205ENST00000494920 UCMAQ8WVF2 138 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 ZNF419Q96HQ0 510 aaPredicted RBP11.27□□□□□ -0.61
KDM1A-205ENST00000494920 ALS2CR12Q96Q35 445 aa11.27□□□□□ -0.61
KDM1A-205ENST00000494920 LRFN3Q9BTN0 628 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms