RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 PABPC3Q9H361 631 aaKnown RBP13.55□□□□□ -0.24
ERCC3-209ENST00000494464 MTG2Q9H4K7 406 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 NHEJ1Q9H9Q4 299 aaPredicted RBP13.55□□□□□ -0.24
ERCC3-209ENST00000494464 SGK2Q9HBY8 427 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 ADAM22Q9P0K1 906 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 SLCO3A1Q9UIG8 710 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 SLC25A13Q9UJS0 675 aa13.55□□□□□ -0.24
ERCC3-209ENST00000494464 E9PAM4 449 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 CNTN5O94779 1100 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 LCA5LO95447 670 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 SEMA4FO95754 770 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 RHOCP08134 193 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 ACSL1P33121 698 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 ATP11AP98196 1134 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 NRG1Q02297 640 aaPredicted RBP13.54□□□□□ -0.24
ERCC3-209ENST00000494464 C1QBPQ07021 282 aaKnown RBP13.54□□□□□ -0.24
ERCC3-209ENST00000494464 CST6Q15828 149 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 ALFQ53S48 1182 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 ARTNQ5T4W7 220 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 DCAF12L1Q5VU92 463 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 PPP1R2P3Q6NXS1 205 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 SYT10Q6XYQ8 523 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 FAM124AQ86V42 546 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 JOSD2Q8TAC2 188 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 RXFP2Q8WXD0 754 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 PTPRN2Q92932 1015 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 RPL10LQ96L21 214 aaKnown RBP13.54□□□□□ -0.24
ERCC3-209ENST00000494464 MYO1AQ9UBC5 1043 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 VPS28Q9UK41 221 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 FZD4Q9ULV1 537 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 HS3ST2Q9Y278 367 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 REXO2Q9Y3B8 237 aaKnown RBP13.54□□□□□ -0.24
ERCC3-209ENST00000494464 CACNA1EQ15878 2313 aa13.54□□□□□ -0.24
ERCC3-209ENST00000494464 UQCRHLA0A096LP55 91 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 A0A1B0GTW7 788 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 TCRBV5S1A1TA0A578 114 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 ARHGAP33O14559 1287 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 RIOK3O14730 519 aaKnown RBP13.53□□□□□ -0.24
ERCC3-209ENST00000494464 ATP9BO43861 1147 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 IPO7O95373 1038 aaKnown RBP13.53□□□□□ -0.24
ERCC3-209ENST00000494464 ADH1BP00325 375 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 UQCRHP07919 91 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 SYPP08247 313 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 ADRB1P08588 477 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 KRT3P12035 628 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 ARHGAP25P42331 645 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 MAPK8P45983 427 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 ATXN3P54252 364 aaPredicted RBP13.53□□□□□ -0.24
ERCC3-209ENST00000494464 CDO1Q16878 200 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 C15orf59Q2T9L4 293 aaPredicted RBP13.53□□□□□ -0.24
ERCC3-209ENST00000494464 ARL13BQ3SXY8 428 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 CCDC14Q49A88 953 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 C6orf118Q5T5N4 469 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 MANEALQ5VSG8 457 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 ZNF783Q6ZMS7 281 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 IRF2BP2Q7Z5L9 587 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 DCAF4L2Q8NA75 395 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 FRS2Q8WU20 508 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 ZNF592Q92610 1267 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 CENPIQ92674 756 aaPredicted RBP13.53□□□□□ -0.24
ERCC3-209ENST00000494464 PSMB7Q99436 277 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 C2orf49Q9BVC5 232 aaPredicted RBP13.53□□□□□ -0.24
ERCC3-209ENST00000494464 SELENOOQ9BVL4 669 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 ZDHHC5Q9C0B5 715 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 MUC3BQ9H195 1237 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 HAUS4Q9H6D7 363 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 C6orf106Q9H6K1 298 aaPredicted RBP13.53□□□□□ -0.24
ERCC3-209ENST00000494464 L2HGDHQ9H9P8 463 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 TMPRSS4Q9NRS4 437 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 SEPT11Q9NVA2 429 aaKnown RBP13.53□□□□□ -0.24
ERCC3-209ENST00000494464 AIPL1Q9NZN9 384 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 ARHGAP20Q9P2F6 1191 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 PPARGC1AQ9UBK2 798 aaKnown RBP13.53□□□□□ -0.24
ERCC3-209ENST00000494464 ZNF212Q9UDV6 495 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 ADAMTS1Q9UHI8 967 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 NCKAP1Q9Y2A7 1128 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.53□□□□□ -0.24
ERCC3-209ENST00000494464 SNX10Q9Y5X0 201 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 CHD5Q8TDI0 1954 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 NUMA1Q14980 2115 aa13.53□□□□□ -0.24
ERCC3-209ENST00000494464 GON4LQ3T8J9 2241 aa13.52□□□□□ -0.24
ERCC3-209ENST00000494464 SIGLEC16A6NMB1 481 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 ALOX15BO15296 676 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 MID1O15344 667 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 KIF5CO60282 957 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 KCNK5O95279 499 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 SERPING1P05155 500 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 CSRP1P21291 193 aaKnown RBP13.52□□□□□ -0.25
ERCC3-209ENST00000494464 GPD1P21695 349 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 C5AR1P21730 350 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 MAOBP27338 520 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 RFC1P35251 1148 aaPredicted RBP13.52□□□□□ -0.25
ERCC3-209ENST00000494464 HDAC4P56524 1084 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 SFMBT2Q5VUG0 894 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 DNAJC24Q6P3W2 148 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 MMAAQ8IVH4 418 aaKnown RBP13.52□□□□□ -0.25
ERCC3-209ENST00000494464 STK40Q8N2I9 435 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 ZCCHC9Q8N567 271 aaKnown RBP13.52□□□□□ -0.25
ERCC3-209ENST00000494464 SH2D3CQ8N5H7 860 aa13.52□□□□□ -0.25
ERCC3-209ENST00000494464 C1orf216Q8TAB5 229 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms