RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 TBC1D3CQ6IPX1 549 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 PHLDB2Q86SQ0 1253 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 PRPF39Q86UA1 669 aaKnown RBP13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 TBC1D3Q8IZP1 549 aaPredicted RBP13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 CPA5Q8WXQ8 436 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 ZCCHC14Q8WYQ9 949 aaKnown RBP13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 FEM1AQ9BSK4 669 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 TKTL2Q9H0I9 626 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 MUC3BQ9H195 1237 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 KDM4CQ9H3R0 1056 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 FANCLQ9NW38 375 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 TMEM59LQ9UK28 342 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 BTBD3Q9Y2F9 522 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 SIK3Q9Y2K2 1263 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 TPRP12270 2363 aaKnown RBP13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 PLXNB3Q9ULL4 1909 aa13.76□□□□□ -0.21
CTDSP1-212ENST00000494067 PTPRBP23467 1997 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 FAM221BA6H8Z2 402 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 GOLGA8SH3BPF8 625 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 ALOX15BO15296 676 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 YKT6O15498 198 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 SLC7A4O43246 635 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 PCDHGA12O60330 932 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 SNAP91O60641 907 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 GFPT2O94808 682 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 LSM8O95777 96 aaKnown RBP13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 MT-CO1P00395 513 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 WNT1P04628 370 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 RHOCP08134 193 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 CD38P28907 300 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 NUDT1P36639 197 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 ANP32AP39687 249 aaKnown RBP13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 VASPP50552 380 aaPredicted RBP13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 FMO1Q01740 532 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 FKBP15Q5T1M5 1219 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 FAM102AQ5T9C2 384 aaPredicted RBP13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 NAA35Q5VZE5 725 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 DBX2Q6ZNG2 339 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 APTXQ7Z2E3 356 aaKnown RBP13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 EMC1Q8N766 993 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 PNPLA1Q8N8W4 532 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 BAHD1Q8TBE0 780 aaPredicted RBP13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 PGAP3Q96FM1 320 aaPredicted RBP13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 CFAP57Q96MR6 1250 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 SLC6A18Q96N87 628 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 PCDHB18PQ96TA0 734 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 C2orf49Q9BVC5 232 aaPredicted RBP13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 STK33Q9BYT3 514 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 MAGEB5Q9BZ81 275 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 MPP6Q9NZW5 540 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 ZNF212Q9UDV6 495 aa13.75□□□□□ -0.21
CTDSP1-212ENST00000494067 H0Y8X5 98 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 K7ERQ8 282 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 TNFSF14O43557 240 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 ATP9BO43861 1147 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 BNIP3LO60238 219 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 MAGEC1O60732 1142 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 GLDCP23378 1020 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 CTSKP43235 329 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 ADPRHP54922 357 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 POLR2FP61218 127 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 PPP2CBP62714 309 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 PPP2CAP67775 309 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 NCAPHQ15003 741 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 DLG2Q15700 870 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 SLC25A52Q3SY17 297 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 POM121L1PQ3SYA9 428 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 C6orf118Q5T5N4 469 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 SETD3Q86TU7 594 aaPredicted RBP13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 GALNT15Q8N3T1 639 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 ATP11CQ8NB49 1132 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 ANKRD20A12PQ8NF67 263 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 JOSD2Q8TAC2 188 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 FAM131CQ96AQ9 280 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 SERAC1Q96JX3 654 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 NLRC4Q9NPP4 1024 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 DYRK4Q9NR20 520 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 GDF3Q9NR23 364 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 METTL5Q9NRN9 209 aaKnown RBP13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 FAM207AQ9NSI2 230 aaPredicted RBP13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 TOR4AQ9NXH8 423 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 TBC1D30Q9Y2I9 924 aa13.74□□□□□ -0.21
CTDSP1-212ENST00000494067 CHD5Q8TDI0 1954 aa13.73□□□□□ -0.21
CTDSP1-212ENST00000494067 A0A0D9SEW6 157 aa13.73□□□□□ -0.21
CTDSP1-212ENST00000494067 GOLGA8CPA6NN73 597 aa13.73□□□□□ -0.21
CTDSP1-212ENST00000494067 DRGXA6NNA5 263 aa13.73□□□□□ -0.21
CTDSP1-212ENST00000494067 MCF2LO15068 1137 aa13.73□□□□□ -0.21
CTDSP1-212ENST00000494067 SMAD6O43541 496 aaKnown RBP13.73□□□□□ -0.21
CTDSP1-212ENST00000494067 CYP1A1P04798 512 aaPredicted RBP13.73□□□□□ -0.21
CTDSP1-212ENST00000494067 ITGAVP06756 1048 aa13.73□□□□□ -0.21
CTDSP1-212ENST00000494067 CTSLP07711 333 aa13.73□□□□□ -0.21
CTDSP1-212ENST00000494067 RECQLP46063 649 aaPredicted RBP13.73□□□□□ -0.21
CTDSP1-212ENST00000494067 ARRB1P49407 418 aaPredicted RBP13.73□□□□□ -0.21
CTDSP1-212ENST00000494067 COPB1P53618 953 aaKnown RBP13.73□□□□□ -0.21
CTDSP1-212ENST00000494067 IL9RQ01113 521 aa13.73□□□□□ -0.21
CTDSP1-212ENST00000494067 PTP4A2Q12974 167 aa13.73□□□□□ -0.21
CTDSP1-212ENST00000494067 Q6ZVU0 165 aa13.73□□□□□ -0.21
CTDSP1-212ENST00000494067 SLCO6A1Q86UG4 719 aa13.73□□□□□ -0.21
CTDSP1-212ENST00000494067 ZNF677Q86XU0 584 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms