RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 SCN10AQ9Y5Y9 1956 aa6.23□□□□□ -1.41
CPSF7-213ENST00000494016 TCRBV7S3A2A0A539 114 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 SMIM23A6NLE4 172 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 APOC4-APOC2K7ER74 178 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 SGK1O00141 431 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 CYB561D2O14569 222 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 XPOTO43592 962 aaKnown RBP6.22□□□□□ -1.41
CPSF7-213ENST00000494016 TRAPPC3O43617 180 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 PRPSAP2O60256 369 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 HUS1O60921 280 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 BEST1O76090 585 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 PGK1P00558 417 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 APOC2P02655 101 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 ABHD2P08910 425 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 C6orf222P0C671 652 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-213ENST00000494016 LCP1P13796 627 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 CHN1P15882 459 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 PTPN1P18031 435 aaKnown RBP6.22□□□□□ -1.41
CPSF7-213ENST00000494016 DRD4P21917 467 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 FUT4P22083 530 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 ADORA2BP29275 332 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 TKTP29401 623 aaKnown RBP6.22□□□□□ -1.41
CPSF7-213ENST00000494016 L1CAMP32004 1257 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 PNPLA4P41247 253 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 FLT3LGP49771 235 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 ATXN1P54253 815 aaKnown RBP6.22□□□□□ -1.41
CPSF7-213ENST00000494016 CDH6P55285 790 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 HDAC4P56524 1084 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 GPX6P59796 221 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 GAD2Q05329 585 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 CACNB2Q08289 660 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-213ENST00000494016 BST2Q10589 180 aaKnown RBP6.22□□□□□ -1.41
CPSF7-213ENST00000494016 TFDP2Q14188 446 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 STAT4Q14765 748 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 MORF4L2Q15014 288 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 PDK2Q15119 407 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 NOMO1Q15155 1222 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 CDO1Q16878 200 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 SV2CQ496J9 727 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 ANKRD20A8PQ5CZ79 823 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 FNBP1LQ5T0N5 605 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 FAM182AQ5T1J6 154 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 MFSD14CQ5VZR4 134 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 WSCD1Q658N2 575 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 TWF2Q6IBS0 349 aaKnown RBP6.22□□□□□ -1.41
CPSF7-213ENST00000494016 ZNF280DQ6N043 979 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 TAF2Q6P1X5 1199 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 SCYL2Q6P3W7 929 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 C1orf228Q6PIY5 440 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 VSTM1Q6UX27 236 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 CD300LGQ6UXG3 332 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 UNC5AQ6ZN44 842 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 SLC26A9Q7LBE3 791 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 SERINC5Q86VE9 423 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 ZDHHC17Q8IUH5 632 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 FUKQ8N0W3 1084 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 PLD5Q8N7P1 536 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 NAT8LQ8N9F0 302 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 APPL2Q8NEU8 664 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 PCDH19Q8TAB3 1148 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 MYCBPAPQ8TBZ2 947 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 SLC2A14Q8TDB8 520 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 ZNF473Q8WTR7 871 aaKnown RBP6.22□□□□□ -1.41
CPSF7-213ENST00000494016 FAM172AQ8WUF8 416 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 ATXN2LQ8WWM7 1075 aaKnown RBP6.22□□□□□ -1.41
CPSF7-213ENST00000494016 CPT1BQ92523 772 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 MAML1Q92585 1016 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 NDRG1Q92597 394 aaKnown RBP6.22□□□□□ -1.41
CPSF7-213ENST00000494016 UBE2FQ969M7 185 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 SENP8Q96LD8 212 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 DHRS1Q96LJ7 313 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 C9orf72Q96LT7 481 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 ZNF560Q96MR9 790 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 XPO6Q96QU8 1125 aaKnown RBP6.22□□□□□ -1.41
CPSF7-213ENST00000494016 RBM15Q96T37 977 aaKnown RBP eCLIP6.22□□□□□ -1.413e-6■□□□□ 8.7
CPSF7-213ENST00000494016 MAK16Q9BXY0 300 aaKnown RBP6.22□□□□□ -1.41
CPSF7-213ENST00000494016 DUSP16Q9BY84 665 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 SENP6Q9GZR1 1112 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-213ENST00000494016 CNOT10Q9H9A5 744 aaKnown RBP6.22□□□□□ -1.41
CPSF7-213ENST00000494016 AGO3Q9H9G7 860 aaKnown RBP6.22□□□□□ -1.41
CPSF7-213ENST00000494016 ATP13A1Q9HD20 1204 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 SAYSD1Q9NPB0 183 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 PPANQ9NQ55 473 aaKnown RBP6.22□□□□□ -1.41
CPSF7-213ENST00000494016 CHST12Q9NRB3 414 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 GPATCH2LQ9NWQ4 482 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 MTMR10Q9NXD2 777 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 CWC15Q9P013 229 aaKnown RBP6.22□□□□□ -1.41
CPSF7-213ENST00000494016 CACNG4Q9UBN1 327 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 HESX1Q9UBX0 185 aa6.22□□□□□ -1.41
CPSF7-213ENST00000494016 UNC80Q8N2C7 3258 aa6.21□□□□□ -1.41
CPSF7-213ENST00000494016 ZNF638Q14966 1978 aaKnown RBP6.21□□□□□ -1.42
CPSF7-213ENST00000494016 BCLAF3A2AJT9 711 aaKnown RBP6.21□□□□□ -1.42
CPSF7-213ENST00000494016 C5orf60A6NFR6 353 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 E7ESA3 106 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 E7EVH7 732 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 CLDN5O00501 218 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 XPO1O14980 1071 aaKnown RBP6.21□□□□□ -1.42
CPSF7-213ENST00000494016 MDM4O15151 490 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 SEPT4O43236 478 aa6.21□□□□□ -1.42
CPSF7-213ENST00000494016 MGEA5O60502 916 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms