RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 FAM110DQ8TAY7 271 aaPredicted RBP6.62□□□□□ -1.35
SMC2-205ENST00000493955 SLC9A6Q92581 669 aa6.62□□□□□ -1.35
SMC2-205ENST00000493955 CELF1Q92879 486 aaKnown RBP6.62□□□□□ -1.35
SMC2-205ENST00000493955 CCDC17Q96LX7 622 aa6.62□□□□□ -1.35
SMC2-205ENST00000493955 PIP5K1AQ99755 562 aa6.62□□□□□ -1.35
SMC2-205ENST00000493955 CADM1Q9BY67 442 aaKnown RBP6.62□□□□□ -1.35
SMC2-205ENST00000493955 NUAK2Q9H093 628 aa6.62□□□□□ -1.35
SMC2-205ENST00000493955 IL1RAPL1Q9NZN1 696 aa6.62□□□□□ -1.35
SMC2-205ENST00000493955 PEMTQ9UBM1 199 aa6.62□□□□□ -1.35
SMC2-205ENST00000493955 DTX4Q9Y2E6 619 aa6.62□□□□□ -1.35
SMC2-205ENST00000493955 SALL3Q9BXA9 1300 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 A0A1W2PQM1 296 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 STRNO43815 780 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 CYP2D6P10635 497 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 ICAM3P32942 547 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 EFEMP1Q12805 493 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 SEMA3AQ14563 771 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 KPNB1Q14974 876 aaKnown RBP6.61□□□□□ -1.35
SMC2-205ENST00000493955 ANXA2RQ3ZCQ2 193 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 RILPL1Q5EBL4 403 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 CC2D1BQ5T0F9 858 aaKnown RBP6.61□□□□□ -1.35
SMC2-205ENST00000493955 CEP85Q6P2H3 762 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 RANBP10Q6VN20 620 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 RASAL3Q86YV0 1011 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 RFX6Q8HWS3 928 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 SETD9Q8NE22 299 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 ADAD1Q96M93 576 aaKnown RBP6.61□□□□□ -1.35
SMC2-205ENST00000493955 KLHL15Q96M94 604 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 SLC32A1Q9H598 525 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 TXNRD2Q9NNW7 524 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 ARL8BQ9NVJ2 186 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 HCFC1R1Q9NWW0 138 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 NKIRAS2Q9NYR9 191 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 ADD3Q9UEY8 706 aaKnown RBP6.61□□□□□ -1.35
SMC2-205ENST00000493955 LIMA1Q9UHB6 759 aaKnown RBP6.61□□□□□ -1.35
SMC2-205ENST00000493955 LYVE1Q9Y5Y7 322 aa6.61□□□□□ -1.35
SMC2-205ENST00000493955 EMSYQ7Z589 1322 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 C17orf113A0A1B0GUU1 675 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 TCRBV5S1A1TA0A578 114 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 B4DLN1 442 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 LDLRAD4O15165 306 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 CEP104O60308 925 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 ZNF202O95125 648 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 MAKP20794 623 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 CD72P21854 359 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 NFKBIAP25963 317 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 CPA2P48052 419 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 HOXA4Q00056 320 aaPredicted RBP6.6□□□□□ -1.35
SMC2-205ENST00000493955 ACVR2BQ13705 512 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 ZNF169Q14929 603 aaPredicted RBP6.6□□□□□ -1.35
SMC2-205ENST00000493955 WTAPQ15007 396 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 ARL13AQ5H913 290 aaPredicted RBP6.6□□□□□ -1.35
SMC2-205ENST00000493955 CFAP58Q5T655 872 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 ZNF474Q6S9Z5 364 aaPredicted RBP6.6□□□□□ -1.35
SMC2-205ENST00000493955 DHRS13Q6UX07 377 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 C17orf99Q6UX52 265 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 SERPINA13PQ6UXR4 307 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 IKBIPQ70UQ0 350 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 GRASPQ7Z6J2 395 aaPredicted RBP6.6□□□□□ -1.35
SMC2-205ENST00000493955 NEK8Q86SG6 692 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 CCDC105Q8IYK2 499 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 TMTC2Q8N394 836 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 TTC39CQ8N584 583 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 LSMEM1Q8N8F7 131 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 SCAIQ8N9R8 606 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 HSPH1Q92598 858 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 ZNF347Q96SE7 839 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 MMRN2Q9H8L6 949 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 ERVK-5Q9HDB9 667 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.6□□□□□ -1.35
SMC2-205ENST00000493955 COL4A3Q01955 1670 aa6.6□□□□□ -1.35
SMC2-205ENST00000493955 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.59□□□□□ -1.35
SMC2-205ENST00000493955 GRID2IPA4D2P6 1211 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 FOXD2O60548 495 aaPredicted RBP6.59□□□□□ -1.35
SMC2-205ENST00000493955 HLA-DQA2P01906 255 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 AKR1A1P14550 325 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 PORP16435 677 aaPredicted RBP6.59□□□□□ -1.35
SMC2-205ENST00000493955 TM4SF1P30408 202 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 IDUAP35475 653 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 ACTN2P35609 894 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 MC1RQ01726 317 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 CREB5Q02930 508 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 PFKFB3Q16875 520 aaPredicted RBP6.59□□□□□ -1.35
SMC2-205ENST00000493955 KLBQ86Z14 1044 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 RHPN2Q8IUC4 686 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 VRK3Q8IV63 474 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 GHDCQ8N2G8 530 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 CPXM2Q8N436 756 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 OR52N4Q8NGI2 321 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 PERPQ96FX8 193 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 P2RY11Q96G91 374 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 GATA5Q9BWX5 397 aaPredicted RBP6.59□□□□□ -1.35
SMC2-205ENST00000493955 Q9N2J8 555 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 HSPB7Q9UBY9 170 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 DHDHQ9UQ10 334 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 KCNE2Q9Y6J6 123 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 RUSC2Q8N2Y8 1516 aa6.59□□□□□ -1.35
SMC2-205ENST00000493955 OR6C68A6NDL8 312 aa6.59□□□□□ -1.36
SMC2-205ENST00000493955 TMEM247A6NEH6 219 aa6.59□□□□□ -1.36
SMC2-205ENST00000493955 HNRNPCP07910 306 aaKnown RBP eCLIP6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms