RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 RSPO4Q2I0M5 234 aaPredicted RBP7.15□□□□□ -1.26
TOP3A-207ENST00000493648 ERMARDQ5T6L9 678 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 FAM46CQ5VWP2 391 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 IL31Q6EBC2 164 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 ALKBH5Q6P6C2 394 aaKnown RBP7.15□□□□□ -1.26
TOP3A-207ENST00000493648 USP30Q70CQ3 517 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 DSG4Q86SJ6 1040 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 FAM124AQ86V42 546 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 CACUL1Q86Y37 369 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 DNAAF5Q86Y56 855 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 MMAAQ8IVH4 418 aaKnown RBP7.15□□□□□ -1.26
TOP3A-207ENST00000493648 VSTM4Q8IW00 320 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 SH2D3CQ8N5H7 860 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 DCAF4L2Q8NA75 395 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 NETO1Q8TDF5 533 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 PTPRN2Q92932 1015 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 CCDC114Q96M63 670 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 HSPA12BQ96MM6 686 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 FAM129BQ96TA1 746 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 PSMB7Q99436 277 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 EIF3CQ99613 913 aaKnown RBP7.15□□□□□ -1.26
TOP3A-207ENST00000493648 EPAS1Q99814 870 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 NUSAP1Q9BXS6 441 aaKnown RBP7.15□□□□□ -1.26
TOP3A-207ENST00000493648 MAGEB5Q9BZ81 275 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 TRIM5Q9C035 493 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 BTBD1Q9H0C5 482 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 PCED1AQ9H1Q7 454 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 MAGEH1Q9H213 219 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 PABPC3Q9H361 631 aaKnown RBP7.15□□□□□ -1.26
TOP3A-207ENST00000493648 DEF6Q9H4E7 631 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 MTG2Q9H4K7 406 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 CATSPERBQ9H7T0 1116 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 SGK2Q9HBY8 427 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 ATP13A1Q9HD20 1204 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 TMEM248Q9NWD8 314 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 FBXL12Q9NXK8 326 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 SUSD2Q9UGT4 822 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 DNAI1Q9UI46 699 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 PILRBQ9UKJ0 227 aa7.15□□□□□ -1.26
TOP3A-207ENST00000493648 CDV3Q9UKY7 258 aaKnown RBP7.15□□□□□ -1.26
TOP3A-207ENST00000493648 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.15□□□□□ -1.26
TOP3A-207ENST00000493648 CXorf51AA0A1B0GTR3 108 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 SSU72P8A0A1W2PR75 194 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 LRRC72A6NJI9 287 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 MEI4A8MW99 385 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 AKR1B15C9JRZ8 316 aaPredicted RBP7.14□□□□□ -1.27
TOP3A-207ENST00000493648 MUC22E2RYF6 1773 aaPredicted RBP7.14□□□□□ -1.27
TOP3A-207ENST00000493648 FAM72CH0Y354 149 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 MCF2LO15068 1137 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 ALOX15BO15296 676 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 MID1O15344 667 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 FGF10O15520 208 aaPredicted RBP7.14□□□□□ -1.27
TOP3A-207ENST00000493648 DAPK3O43293 454 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 AKR1B10O60218 316 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 BNIP3LO60238 219 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 PRPSAP2O60256 369 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 SNAP91O60641 907 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 RNASEH2AO75792 299 aaKnown RBP7.14□□□□□ -1.27
TOP3A-207ENST00000493648 IL1BP01584 269 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 SRCP12931 536 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 C5AR1P21730 350 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 ACSL1P33121 698 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 PCK1P35558 622 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 EIF4A3P38919 411 aaKnown RBP7.14□□□□□ -1.27
TOP3A-207ENST00000493648 RECQLP46063 649 aaPredicted RBP7.14□□□□□ -1.27
TOP3A-207ENST00000493648 PSMD8P48556 350 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 GEMIN4P57678 1058 aaKnown RBP7.14□□□□□ -1.27
TOP3A-207ENST00000493648 YBEYP58557 167 aaPredicted RBP7.14□□□□□ -1.27
TOP3A-207ENST00000493648 TPI1P60174 286 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 OGDHQ02218 1023 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 GFPT1Q06210 699 aaPredicted RBP7.14□□□□□ -1.27
TOP3A-207ENST00000493648 CCDC15Q0P6D6 951 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 POLD3Q15054 466 aaPredicted RBP7.14□□□□□ -1.27
TOP3A-207ENST00000493648 SLC18A3Q16572 532 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 BOLA3Q53S33 107 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 TRIM61Q5EBN2 209 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 ARTNQ5T4W7 220 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 FAM72AQ5TYM5 149 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 MANEALQ5VSG8 457 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 DCAF12L1Q5VU92 463 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 FAM72DQ6L9T8 149 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 SLC23A3Q6PIS1 610 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 SARM1Q6SZW1 724 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 NLRP14Q86W24 1093 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 FAM72BQ86X60 149 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 ZNF354CQ86Y25 554 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 PSTKQ8IV42 348 aaKnown RBP7.14□□□□□ -1.27
TOP3A-207ENST00000493648 CNGA4Q8IV77 575 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 SLC41A1Q8IVJ1 513 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 PYROXD2Q8N2H3 581 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 STK40Q8N2I9 435 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 HDDC3Q8N4P3 179 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 OR7D4Q8NG98 312 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 FRS2Q8WU20 508 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 ARHGEF2Q92974 986 aaKnown RBP7.14□□□□□ -1.27
TOP3A-207ENST00000493648 RMDN1Q96DB5 314 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 CCDC42Q96M95 316 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 DNAJC7Q99615 494 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 RTKNQ9BST9 563 aa7.14□□□□□ -1.27
TOP3A-207ENST00000493648 NUP85Q9BW27 656 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms