RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 IGHMBP2P38935 993 aaKnown RBP3.65□□□□□ -1.83
PTCD3-218ENST00000493430 SOX2P48431 317 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 P2RX3P56373 397 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 HYAL1Q12794 435 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 GAB1Q13480 694 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 BFSP2Q13515 415 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 ASIC2Q16515 512 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 HLFQ16534 295 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 GLE1Q53GS7 698 aaKnown RBP3.65□□□□□ -1.83
PTCD3-218ENST00000493430 ODR4Q5SWX8 454 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 NXNQ6DKJ4 435 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 RFX6Q8HWS3 928 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 TCEAL8Q8IYN2 117 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 MAGEB6Q8N7X4 407 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 GJA10Q969M2 543 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 ARHGAP39Q9C0H5 1083 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 RBM38Q9H0Z9 239 aaKnown RBP3.65□□□□□ -1.83
PTCD3-218ENST00000493430 ZBTB26Q9HCK0 441 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 HEYLQ9NQ87 328 aaPredicted RBP3.65□□□□□ -1.83
PTCD3-218ENST00000493430 RXFP3Q9NSD7 469 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 TMOD4Q9NZQ9 345 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 PTPRFP10586 1907 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 MYH2Q9UKX2 1941 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 PAPPA2Q9BXP8 1791 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 UBN2Q6ZU65 1347 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 DOCK2Q92608 1830 aa3.65□□□□□ -1.83
PTCD3-218ENST00000493430 MGAMO43451 1857 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 NPC1L1Q9UHC9 1359 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 LAMB1P07942 1786 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 THSD7BQ9C0I4 1608 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 A0A0G2JK05 382 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 TPP1O14773 563 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 THAP12O43422 761 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 CCNT2O60583 730 aaKnown RBP3.64□□□□□ -1.83
PTCD3-218ENST00000493430 CBFA2T3O75081 653 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 CAMTA2O94983 1202 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 ENO1P06733 434 aaKnown RBP3.64□□□□□ -1.83
PTCD3-218ENST00000493430 AKR1A1P14550 325 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 DRD1P21728 446 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 NDUFS1P28331 727 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 ATICP31939 592 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 ARRB2P32121 409 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 ZNF84P51523 738 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 TEFQ10587 303 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 SEMA3BQ13214 749 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 SMTNL2Q2TAL5 461 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 PIK3CD-AS1Q5SR53 167 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 LIPMQ5VYY2 423 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 PRR5LQ6MZQ0 368 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 ZNF790Q6PG37 636 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 CHST15Q7LFX5 561 aaPredicted RBP3.64□□□□□ -1.83
PTCD3-218ENST00000493430 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.64□□□□□ -1.83
PTCD3-218ENST00000493430 RAVER1Q8IY67 606 aaKnown RBP3.64□□□□□ -1.83
PTCD3-218ENST00000493430 FBXL14Q8N1E6 418 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 IQCF1Q8N6M8 205 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 ZNF845Q96IR2 970 aaPredicted RBP3.64□□□□□ -1.83
PTCD3-218ENST00000493430 WDR24Q96S15 920 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 PLEKHF1Q96S99 279 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 PIMREGQ9BSJ6 248 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 HTATIP2Q9BUP3 242 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 TRIM2Q9C040 744 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 MYLK2Q9H1R3 596 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 ERVK-5Q9HDB9 667 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 DDX20Q9UHI6 824 aaKnown RBP3.64□□□□□ -1.83
PTCD3-218ENST00000493430 LAS1LQ9Y4W2 734 aaKnown RBP3.64□□□□□ -1.83
PTCD3-218ENST00000493430 EMSYQ7Z589 1322 aa3.64□□□□□ -1.83
PTCD3-218ENST00000493430 PHIPQ8WWQ0 1821 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 SNED1Q8TER0 1413 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 F8W8V4 182 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 COQ9O75208 318 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 SGPL1O95470 568 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 SCGB1D2O95969 90 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 SERPINB2P05120 415 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 EIF2S2P20042 333 aaKnown RBP3.63□□□□□ -1.83
PTCD3-218ENST00000493430 MT3P25713 68 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 TNFRSF8P28908 595 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 TM4SF1P30408 202 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 GPS1Q13098 491 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 PPP2R5AQ15172 486 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 ELF2Q15723 593 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 NFE2Q16621 373 aaPredicted RBP3.63□□□□□ -1.83
PTCD3-218ENST00000493430 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 FAM90A2PQ658T7 463 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 NUGGCQ68CJ6 796 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 ABLIM2Q6H8Q1 611 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 DHRS13Q6UX07 377 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 KYAT3Q6YP21 454 aaKnown RBP3.63□□□□□ -1.83
PTCD3-218ENST00000493430 C2CD5Q86YS7 1000 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 TTC5Q8N0Z6 440 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 ARL14EPQ8N8R7 260 aaPredicted RBP3.63□□□□□ -1.83
PTCD3-218ENST00000493430 OR52L2PQ8NGH6 319 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 OVCA2Q8WZ82 227 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 LPAR1Q92633 364 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 PMM1Q92871 262 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 IQCDQ96DY2 449 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 FAM84BQ96KN1 310 aaPredicted RBP3.63□□□□□ -1.83
PTCD3-218ENST00000493430 SF3B5Q9BWJ5 86 aaKnown RBP3.63□□□□□ -1.83
PTCD3-218ENST00000493430 UNKQ9C0B0 810 aaKnown RBP3.63□□□□□ -1.83
PTCD3-218ENST00000493430 BTBD1Q9H0C5 482 aa3.63□□□□□ -1.83
PTCD3-218ENST00000493430 AS3MTQ9HBK9 375 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms