RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 NDRG2Q9UN36 371 aaKnown RBP17.6■□□□□ 0.41
LIME1-208ENST00000493265 ARHGAP42A6NI28 874 aa17.59■□□□□ 0.41
LIME1-208ENST00000493265 CBX4O00257 560 aa17.59■□□□□ 0.41
LIME1-208ENST00000493265 SNAP91O60641 907 aa17.59■□□□□ 0.41
LIME1-208ENST00000493265 TGM2P21980 687 aa17.59■□□□□ 0.41
LIME1-208ENST00000493265 GLDCP23378 1020 aa17.59■□□□□ 0.41
LIME1-208ENST00000493265 NDST2P52849 883 aa17.59■□□□□ 0.41
LIME1-208ENST00000493265 SEC13P55735 322 aa17.59■□□□□ 0.41
LIME1-208ENST00000493265 SLC10A2Q12908 348 aaPredicted RBP17.59■□□□□ 0.41
LIME1-208ENST00000493265 PLEKHG6Q3KR16 790 aa17.59■□□□□ 0.41
LIME1-208ENST00000493265 MBLAC2Q68D91 279 aa17.59■□□□□ 0.41
LIME1-208ENST00000493265 ARHGAP36Q6ZRI8 547 aa17.59■□□□□ 0.41
LIME1-208ENST00000493265 AHI1Q8N157 1196 aa17.59■□□□□ 0.41
LIME1-208ENST00000493265 TERB1Q8NA31 727 aa17.59■□□□□ 0.41
LIME1-208ENST00000493265 SORCS1Q8WY21 1168 aa17.59■□□□□ 0.41
LIME1-208ENST00000493265 P3H4Q92791 437 aa17.59■□□□□ 0.41
LIME1-208ENST00000493265 ARHGEF2Q92974 986 aaKnown RBP17.59■□□□□ 0.41
LIME1-208ENST00000493265 LMLNQ96KR4 655 aa17.59■□□□□ 0.41
LIME1-208ENST00000493265 MAGEH1Q9H213 219 aa17.59■□□□□ 0.41
LIME1-208ENST00000493265 LRRC19Q9H756 370 aa17.59■□□□□ 0.41
LIME1-208ENST00000493265 DTLQ9NZJ0 730 aa17.59■□□□□ 0.41
LIME1-208ENST00000493265 INTS6Q9UL03 887 aaKnown RBP17.59■□□□□ 0.41
LIME1-208ENST00000493265 EFR3BQ9Y2G0 817 aa17.59■□□□□ 0.41
LIME1-208ENST00000493265 PRRT4C9JH25 899 aa17.58■□□□□ 0.4
LIME1-208ENST00000493265 URI1O94763 535 aaPredicted RBP17.58■□□□□ 0.4
LIME1-208ENST00000493265 GLULP15104 373 aa17.58■□□□□ 0.4
LIME1-208ENST00000493265 POLR2EP19388 210 aaKnown RBP17.58■□□□□ 0.4
LIME1-208ENST00000493265 EIF2DP41214 584 aaKnown RBP17.58■□□□□ 0.4
LIME1-208ENST00000493265 GRIA2P42262 883 aa17.58■□□□□ 0.4
LIME1-208ENST00000493265 CTSOP43234 321 aaPredicted RBP17.58■□□□□ 0.4
LIME1-208ENST00000493265 YBEYP58557 167 aaPredicted RBP17.58■□□□□ 0.4
LIME1-208ENST00000493265 FOXK2Q01167 660 aa17.58■□□□□ 0.4
LIME1-208ENST00000493265 OTUD4Q01804 1114 aaKnown RBP17.58■□□□□ 0.4
LIME1-208ENST00000493265 SLC12A1Q13621 1099 aa17.58■□□□□ 0.4
LIME1-208ENST00000493265 PARP15Q460N3 678 aa17.58■□□□□ 0.4
LIME1-208ENST00000493265 PREPLQ4J6C6 727 aaPredicted RBP17.58■□□□□ 0.4
LIME1-208ENST00000493265 AFMIDQ63HM1 303 aa17.58■□□□□ 0.4
LIME1-208ENST00000493265 LINGO4Q6UY18 593 aa17.58■□□□□ 0.4
LIME1-208ENST00000493265 ADIPOR2Q86V24 386 aa17.58■□□□□ 0.4
LIME1-208ENST00000493265 ZC3H18Q86VM9 953 aaKnown RBP17.58■□□□□ 0.4
LIME1-208ENST00000493265 PHTF2Q8N3S3 785 aa17.58■□□□□ 0.4
LIME1-208ENST00000493265 ATPAF2Q8N5M1 289 aa17.58■□□□□ 0.4
LIME1-208ENST00000493265 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.58■□□□□ 0.4
LIME1-208ENST00000493265 CCNYQ8ND76 341 aa17.58■□□□□ 0.4
LIME1-208ENST00000493265 CYB5D2Q8WUJ1 264 aa17.58■□□□□ 0.4
LIME1-208ENST00000493265 EXOC4Q96A65 974 aa17.58■□□□□ 0.4
LIME1-208ENST00000493265 PRDM16Q9HAZ2 1276 aa17.58■□□□□ 0.4
LIME1-208ENST00000493265 WNT16Q9UBV4 365 aa17.58■□□□□ 0.4
LIME1-208ENST00000493265 HPCAL4Q9UM19 191 aa17.58■□□□□ 0.4
LIME1-208ENST00000493265 R3HDM2Q9Y2K5 976 aaKnown RBP17.58■□□□□ 0.4
LIME1-208ENST00000493265 SLC27A6Q9Y2P4 619 aa17.58■□□□□ 0.4
LIME1-208ENST00000493265 OR51B4Q9Y5P0 310 aa17.58■□□□□ 0.4
LIME1-208ENST00000493265 KIAA1549LQ6ZVL6 1849 aa17.58■□□□□ 0.4
LIME1-208ENST00000493265 WDR87Q6ZQQ6 2873 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 ANTXRLA6NF34 631 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 PGRMC1O00264 195 aaKnown RBP17.57■□□□□ 0.4
LIME1-208ENST00000493265 MAN2B1O00754 1011 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 EGFP01133 1207 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 TUBB4AP04350 444 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 ETFBP38117 255 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 ID4P47928 161 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 GRSF1Q12849 480 aaKnown RBP eCLIP17.57■□□□□ 0.4
LIME1-208ENST00000493265 SERINC3Q13530 473 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 TMEM215Q68D42 235 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 FSTL4Q6MZW2 842 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 ZNF852Q6ZMS4 543 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 ZNF783Q6ZMS7 281 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 NUDT18Q6ZVK8 323 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 ACTL9Q8TC94 416 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 WFIKKN2Q8TEU8 576 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 C1orf54Q8WWF1 131 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 ALG14Q96F25 216 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 RPL10LQ96L21 214 aaKnown RBP17.57■□□□□ 0.4
LIME1-208ENST00000493265 C2orf49Q9BVC5 232 aaPredicted RBP17.57■□□□□ 0.4
LIME1-208ENST00000493265 AP1M1Q9BXS5 423 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 TBC1D17Q9HA65 648 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 SP110Q9HB58 689 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 ZDHHC4Q9NPG8 344 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 VPS51Q9UID3 782 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 ACTL7AQ9Y615 435 aa17.57■□□□□ 0.4
LIME1-208ENST00000493265 H7C0C1 242 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 J3KR12 359 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 APOC4-APOC2K7ER74 178 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 ZNF500O60304 480 aaPredicted RBP17.56■□□□□ 0.4
LIME1-208ENST00000493265 APOC2P02655 101 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 PRLRP16471 622 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 ATP5OP48047 213 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 NR2C2P49116 596 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 PRKCQQ04759 706 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 GALNT2Q10471 571 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 AP1B1Q10567 949 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 KLF1Q13351 362 aaPredicted RBP17.56■□□□□ 0.4
LIME1-208ENST00000493265 SNX1Q13596 522 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 DMC1Q14565 340 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 UBXN2BQ14CS0 331 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 TMEM196Q5HYL7 178 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 DNTTIP2Q5QJE6 756 aaKnown RBP17.56■□□□□ 0.4
LIME1-208ENST00000493265 EMC10Q5UCC4 262 aa17.56■□□□□ 0.4
LIME1-208ENST00000493265 KIAA0907Q7Z7F0 614 aaPredicted RBP17.56■□□□□ 0.4
LIME1-208ENST00000493265 RASGEF1CQ8N431 466 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms