RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 C19orf18Q8NEA5 215 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 STAG3L4Q8TBR4 150 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 PROX1Q92786 737 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 AHCYL2Q96HN2 611 aaKnown RBP16.55■□□□□ 0.24
BRAT1-206ENST00000493232 TSPAN18Q96SJ8 248 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 RERGLQ9H628 205 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 SAR1AQ9NR31 198 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 PRKAG3Q9UGI9 489 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 AK9Q5TCS8 1911 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 CYP3A7-CYP3A51PA0A087WV96 503 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 PEX1O43933 1283 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 GLRA2P23416 452 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 CYP3A7P24462 503 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 CXCR2P25025 360 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 FEN1P39748 380 aaKnown RBP16.55■□□□□ 0.24
BRAT1-206ENST00000493232 EPHX4Q8IUS5 362 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 RNF208Q9H0X6 261 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 TPRKBQ9Y3C4 175 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 UBIAD1Q9Y5Z9 338 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 F8VP50 259 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 MAFO75444 373 aaPredicted RBP16.55■□□□□ 0.24
BRAT1-206ENST00000493232 ANXA5P08758 320 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 ZCCHC18P0CG32 403 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 MLH1P40692 756 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 WSCD1Q658N2 575 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 CES3Q6UWW8 571 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 PLPPR4Q7Z2D5 763 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 HDDC2Q7Z4H3 204 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 ZNF75CPQ92670 426 aaPredicted RBP16.55■□□□□ 0.24
BRAT1-206ENST00000493232 RMND5BQ96G75 393 aaPredicted RBP16.55■□□□□ 0.24
BRAT1-206ENST00000493232 DDX20Q9UHI6 824 aaKnown RBP16.55■□□□□ 0.24
BRAT1-206ENST00000493232 GNPTGQ9UJJ9 305 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 PCDHGC5Q9Y5F6 944 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 NTSP30990 170 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 BEX3Q00994 111 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 INAQ16352 499 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 FAM187BQ17R55 369 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 DOK6Q6PKX4 331 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 PPP1R14AQ96A00 147 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 TMEM237Q96Q45 408 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 C9orf16Q9BUW7 83 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 SERHL2Q9H4I8 314 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 ZDHHC6Q9H6R6 413 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 SERHLQ9NQF3 203 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 EVA1BQ9NVM1 165 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 TMEM216Q9P0N5 145 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 ZMYM5Q9UJ78 669 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 CYP1A2P05177 515 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 LTA4HP09960 611 aaKnown RBP16.55■□□□□ 0.24
BRAT1-206ENST00000493232 PSMB9P28065 219 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 RPL14P50914 215 aaKnown RBP16.55■□□□□ 0.24
BRAT1-206ENST00000493232 NEK10Q6ZWH5 1172 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 TRAPPC5Q8IUR0 188 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 ATAD3AQ9NVI7 634 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 KCNK4Q9NYG8 393 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 SAE1Q9UBE0 346 aaPredicted RBP16.55■□□□□ 0.24
BRAT1-206ENST00000493232 NDOR1Q9UHB4 597 aa16.55■□□□□ 0.24
BRAT1-206ENST00000493232 QSOX1O00391 747 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 PDE5AO76074 875 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 EPN2O95208 641 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 ERBB2P04626 1255 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 UQCRBP14927 111 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 ATP6V1C1P21283 382 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 THOP1P52888 689 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 TSNQ15631 228 aaKnown RBP16.54■□□□□ 0.24
BRAT1-206ENST00000493232 SH3RF1Q7Z6J0 888 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 FAM45AQ8TCE6 357 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 ANKDD1BA6NHY2 528 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 FAM25AB3EWG3 89 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 FAM25CB3EWG5 89 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 FAM25GB3EWG6 89 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 CHKAP35790 457 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 PSMD7P51665 324 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 SLC34A1Q06495 639 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 IL27RAQ6UWB1 636 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 KRT73Q86Y46 540 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 CXorf40AQ8TE69 158 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 PIH1D1Q9NWS0 290 aaKnown RBP16.54■□□□□ 0.24
BRAT1-206ENST00000493232 A0A087X0B3 334 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 SMNDC1O75940 238 aaKnown RBP eCLIP16.54■□□□□ 0.24
BRAT1-206ENST00000493232 CLCN5P51795 746 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 MAMLD1Q13495 774 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 SNX32Q86XE0 403 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 AENQ8WTP8 325 aaKnown RBP16.54■□□□□ 0.24
BRAT1-206ENST00000493232 OLFM1Q99784 485 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 SIK3Q9Y2K2 1263 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 USP20Q9Y2K6 914 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 C2CD2Q9Y426 696 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 CLOCKO15516 846 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 CSH1P0DML2 217 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 CSH2P0DML3 217 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 RPL9P32969 192 aaKnown RBP16.54■□□□□ 0.24
BRAT1-206ENST00000493232 PPP3CAQ08209 521 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 CDC73Q6P1J9 531 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 POMGNT2Q8NAT1 580 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 TPD52L3Q96J77 140 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 MLPHQ9BV36 600 aaPredicted RBP16.54■□□□□ 0.24
BRAT1-206ENST00000493232 ADI1Q9BV57 179 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 CHST7Q9NS84 486 aa16.54■□□□□ 0.24
BRAT1-206ENST00000493232 PSME2Q9UL46 239 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms