RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 TNFAIP3P21580 790 aa27.79■■■□□ 2.04
SH3GL3-204ENST00000492099 GPD1P21695 349 aa27.79■■■□□ 2.04
SH3GL3-204ENST00000492099 FAM46CQ5VWP2 391 aa27.79■■■□□ 2.04
SH3GL3-204ENST00000492099 ACAD10Q6JQN1 1059 aa27.79■■■□□ 2.04
SH3GL3-204ENST00000492099 WDR59Q6PJI9 974 aa27.79■■■□□ 2.04
SH3GL3-204ENST00000492099 IL27RAQ6UWB1 636 aa27.79■■■□□ 2.04
SH3GL3-204ENST00000492099 AADATQ8N5Z0 425 aa27.79■■■□□ 2.04
SH3GL3-204ENST00000492099 OR2I1PQ8NGU4 316 aa27.79■■■□□ 2.04
SH3GL3-204ENST00000492099 OR2T34Q8NGX1 318 aa27.79■■■□□ 2.04
SH3GL3-204ENST00000492099 FAM172AQ8WUF8 416 aa27.79■■■□□ 2.04
SH3GL3-204ENST00000492099 VPS51Q9UID3 782 aa27.79■■■□□ 2.04
SH3GL3-204ENST00000492099 FARP1Q9Y4F1 1045 aaPredicted RBP27.79■■■□□ 2.04
SH3GL3-204ENST00000492099 A0A0D9SEW6 157 aa27.78■■■□□ 2.04
SH3GL3-204ENST00000492099 ANKRD62A6NC57 917 aa27.78■■■□□ 2.04
SH3GL3-204ENST00000492099 FAM47DPA6NHR8 397 aa27.78■■■□□ 2.04
SH3GL3-204ENST00000492099 MCF2LO15068 1137 aa27.78■■■□□ 2.04
SH3GL3-204ENST00000492099 SNAP91O60641 907 aa27.78■■■□□ 2.04
SH3GL3-204ENST00000492099 SERPINC1P01008 464 aa27.78■■■□□ 2.04
SH3GL3-204ENST00000492099 CLCN6P51797 869 aa27.78■■■□□ 2.04
SH3GL3-204ENST00000492099 HDAC4P56524 1084 aa27.78■■■□□ 2.04
SH3GL3-204ENST00000492099 TEAD4Q15561 434 aa27.78■■■□□ 2.04
SH3GL3-204ENST00000492099 RAB6CQ53S08 254 aa27.78■■■□□ 2.04
SH3GL3-204ENST00000492099 DNAJC24Q6P3W2 148 aa27.78■■■□□ 2.04
SH3GL3-204ENST00000492099 NCEH1Q6PIU2 408 aa27.78■■■□□ 2.04
SH3GL3-204ENST00000492099 PIP4P1Q86T03 277 aa27.78■■■□□ 2.04
SH3GL3-204ENST00000492099 ATP11CQ8NB49 1132 aa27.78■■■□□ 2.04
SH3GL3-204ENST00000492099 DEFB124Q8NES8 71 aa27.78■■■□□ 2.04
SH3GL3-204ENST00000492099 RAB6CQ9H0N0 254 aa27.78■■■□□ 2.04
SH3GL3-204ENST00000492099 ZNF212Q9UDV6 495 aa27.78■■■□□ 2.04
SH3GL3-204ENST00000492099 TPX2Q9ULW0 747 aaKnown RBP27.78■■■□□ 2.04
SH3GL3-204ENST00000492099 ADAMTS9Q9P2N4 1935 aa27.78■■■□□ 2.04
SH3GL3-204ENST00000492099 TCRBV5S1A1TA0A578 114 aa27.77■■■□□ 2.04
SH3GL3-204ENST00000492099 SYCE3A1L190 88 aa27.77■■■□□ 2.04
SH3GL3-204ENST00000492099 LRRC53A6NM62 1247 aa27.77■■■□□ 2.04
SH3GL3-204ENST00000492099 GJB3O75712 270 aa27.77■■■□□ 2.04
SH3GL3-204ENST00000492099 SRCP12931 536 aa27.77■■■□□ 2.04
SH3GL3-204ENST00000492099 PTMSP20962 102 aa27.77■■■□□ 2.04
SH3GL3-204ENST00000492099 PMLP29590 882 aa27.77■■■□□ 2.04
SH3GL3-204ENST00000492099 TPM4P67936 248 aa27.77■■■□□ 2.04
SH3GL3-204ENST00000492099 Q6ZVU0 165 aa27.77■■■□□ 2.04
SH3GL3-204ENST00000492099 MCOLN2Q8IZK6 566 aa27.77■■■□□ 2.04
SH3GL3-204ENST00000492099 CCDC114Q96M63 670 aa27.77■■■□□ 2.04
SH3GL3-204ENST00000492099 NAP1L5Q96NT1 182 aaPredicted RBP27.77■■■□□ 2.04
SH3GL3-204ENST00000492099 TM9SF3Q9HD45 589 aa27.77■■■□□ 2.04
SH3GL3-204ENST00000492099 PPM1HQ9ULR3 514 aa27.77■■■□□ 2.04
SH3GL3-204ENST00000492099 C1QTNF3-AMACRE9PGA6 284 aa27.76■■■□□ 2.03
SH3GL3-204ENST00000492099 CER1O95813 267 aa27.76■■■□□ 2.03
SH3GL3-204ENST00000492099 MT-CO1P00395 513 aa27.76■■■□□ 2.03
SH3GL3-204ENST00000492099 IGHV4-34P06331 123 aa27.76■■■□□ 2.03
SH3GL3-204ENST00000492099 CSNK1EP49674 416 aaKnown RBP27.76■■■□□ 2.03
SH3GL3-204ENST00000492099 ZNF143P52747 638 aaPredicted RBP27.76■■■□□ 2.03
SH3GL3-204ENST00000492099 ZNF252P-AS1Q0IIN9 211 aa27.76■■■□□ 2.03
SH3GL3-204ENST00000492099 MANEALQ5VSG8 457 aa27.76■■■□□ 2.03
SH3GL3-204ENST00000492099 OR14C36Q8NHC7 312 aa27.76■■■□□ 2.03
SH3GL3-204ENST00000492099 NTAN1Q96AB6 310 aa27.76■■■□□ 2.03
SH3GL3-204ENST00000492099 VCPIP1Q96JH7 1222 aa27.76■■■□□ 2.03
SH3GL3-204ENST00000492099 SYT11Q9BT88 431 aa27.76■■■□□ 2.03
SH3GL3-204ENST00000492099 EDEM3Q9BZQ6 932 aa27.76■■■□□ 2.03
SH3GL3-204ENST00000492099 AIPL1Q9NZN9 384 aa27.76■■■□□ 2.03
SH3GL3-204ENST00000492099 A0A1W2PPC4 97 aa27.75■■■□□ 2.03
SH3GL3-204ENST00000492099 SLC7A4O43246 635 aa27.75■■■□□ 2.03
SH3GL3-204ENST00000492099 CD59P13987 128 aa27.75■■■□□ 2.03
SH3GL3-204ENST00000492099 DRD3P35462 400 aa27.75■■■□□ 2.03
SH3GL3-204ENST00000492099 GRIA4P48058 902 aa27.75■■■□□ 2.03
SH3GL3-204ENST00000492099 ADPRHP54922 357 aa27.75■■■□□ 2.03
SH3GL3-204ENST00000492099 GNA12Q03113 381 aa27.75■■■□□ 2.03
SH3GL3-204ENST00000492099 SLC20A2Q08357 652 aa27.75■■■□□ 2.03
SH3GL3-204ENST00000492099 HNRNPDQ14103 355 aaKnown RBP27.75■■■□□ 2.03
SH3GL3-204ENST00000492099 NR1I3Q14994 352 aa27.75■■■□□ 2.03
SH3GL3-204ENST00000492099 ASIC2Q16515 512 aa27.75■■■□□ 2.03
SH3GL3-204ENST00000492099 RETSATQ6NUM9 610 aa27.75■■■□□ 2.03
SH3GL3-204ENST00000492099 RWDD4Q6NW29 188 aaKnown RBP27.75■■■□□ 2.03
SH3GL3-204ENST00000492099 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP27.75■■■□□ 2.03
SH3GL3-204ENST00000492099 OR7D4Q8NG98 312 aa27.75■■■□□ 2.03
SH3GL3-204ENST00000492099 SPON2Q9BUD6 331 aa27.75■■■□□ 2.03
SH3GL3-204ENST00000492099 KDM4CQ9H3R0 1056 aa27.75■■■□□ 2.03
SH3GL3-204ENST00000492099 GAREM1Q9H706 876 aa27.75■■■□□ 2.03
SH3GL3-204ENST00000492099 SLCO1B1Q9Y6L6 691 aa27.75■■■□□ 2.03
SH3GL3-204ENST00000492099 A0A1B0GVT2 93 aa27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 CBX4O00257 560 aa27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 BNIP3LO60238 219 aa27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 PLEKP08567 350 aaPredicted RBP27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 RHOQP17081 205 aa27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 DESP17661 470 aa27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 ETFBP38117 255 aa27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 CCR5P51681 352 aa27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 BNC1Q01954 994 aa27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 SFMBT2Q5VUG0 894 aa27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 DCUN1D2Q6PH85 259 aa27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 SLFN11Q7Z7L1 901 aa27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 DRC7Q8IY82 874 aa27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 CCDC185Q8N715 623 aa27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 PIP4K2CQ8TBX8 421 aa27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 FAM131CQ96AQ9 280 aa27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 MCEEQ96PE7 176 aa27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 ORAI3Q9BRQ5 295 aa27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 CBX8Q9HC52 389 aa27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 ATP13A1Q9HD20 1204 aa27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 ANGPTL2Q9UKU9 493 aa27.74■■■□□ 2.03
SH3GL3-204ENST00000492099 SARDHQ9UL12 918 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms